RetrogeneDB ID: | retro_amel_576 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192508.1:940005..940662(+) | ||
Located in intron of: | ENSAMEG00000003272 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000005805 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.73 % |
Parental protein coverage: | 82.16 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID |
GPKKHLKRVA.PKHWMLDKL.G..AP.PS.GP.KL.ECLPLIIFLRNRLKYAL.GDEVKKIC...FIKI. | |
Retrocopy | GPKKHLKRVAVPKHWMLDKL-GMLAPCPSIGPYKLKECLPLIIFLRNRLKYALRGDEVKKICI*LFIKIG |
Parental | GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD |
GKV.TDIT..AGFMDVISIDKTG.NF.LI.DTKG.FA.H.ITPEEAKY.LCKVRKIF.G..GIPHLVTHD | |
Retrocopy | GKVQTDITCAAGFMDVISIDKTG-NFHLICDTKGCFAIHWITPEEAKYNLCKVRKIFGGGGGIPHLVTHD |
Parental | ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA |
A....YPDPLIKVNDTIQ.DLETGKIT.FIKFDT.NLC.VT.GANLG.IGVI..RERHPGSFD..HV.DA | |
Retrocopy | ACITHYPDPLIKVNDTIQTDLETGKITGFIKFDTVNLCLVTRGANLGKIGVISHRERHPGSFDIAHVRDA |
Parental | NGNSFATRLSN |
N.NS....LS. | |
Retrocopy | NSNS*LIPLSH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |