RetrogeneDB ID: | retro_pvam_835 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_1303:17176..17629(-) | ||
Located in intron of: | ENSPVAG00000011161 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSPVAG00000012882 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 71.43 % |
Parental protein coverage: | 57.79 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | KHWMLDKLTGVFAPRPSTGPHKLRECLPLII-FLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA |
KH.MLDKLTGVF.P...TGPHKLRECL.LII.F.RNRLK.A.T..EVKKICMQ.FIKI.GKV.TD...P. | |
Retrocopy | KH*MLDKLTGVFVPLLLTGPHKLRECLSLII<FIRNRLKSAMTRNEVKKICMQQFIKIHGKV*TDTANPG |
Parental | GFMDVISIDKTGENFRLVYDTKGRFAVHRITTEEAKYKLCKVRKIFVG-TKGIPHLVTHDARTIRYPDPL |
GFMDVISIDKT.ENF.L.YDTK..FAV...T.EE.KYKLCK.RKIFVG.....PHLVTH.A.TI.YPD.L | |
Retrocopy | GFMDVISIDKTVENFHLIYDTKSGFAVW-LTYEEVKYKLCKIRKIFVG>XXXXPHLVTHGAQTIHYPDLL |
Parental | IKVNDTIQIDLETG |
..V...IQIDLETG | |
Retrocopy | LRVKNAIQIDLETG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |