RetrogeneDB ID: | retro_pcap_360 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_48819:8395..8619(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSPCAG00000000761 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 53.95 % |
Parental protein coverage: | 56.39 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | EVKKICMQRFIKIDGKVRTDITYPAGFM-DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRK |
E.KKIC...FI....KV.T..TY......DVISI.KT.E.F.L..D.KG..AV..I.P.EAKYKL.K.RK | |
Retrocopy | EMKKICTW*FIGMESKVCTNVTYSVELR<DVISITKTRESFCLTCDAKGHCAVYHIRPGEAKYKLYKMRK |
Parental | IFVGTK |
I...TK | |
Retrocopy | IAACTK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |