RetrogeneDB ID: | retro_chof_585 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_124274:2096..2501(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000012552 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL32 | ||
Ensembl ID: | ENSCHOG00000013534 | ||
Aliases: | None | ||
Description: | ribosomal protein L32 [Source:HGNC Symbol;Acc:10336] |
Percent Identity: | 90.37 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAALRPLIKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHML |
MAALRPL..PKIVKKRTKKFI.H.SD.YVKIK.NWRKPRGIDNR..RRFK.QIL.PNIGYGSNKKTKHML | |
Retrocopy | MAALRPLVEPKIVKKRTKKFIQHRSD*YVKIKHNWRKPRGIDNRMWRRFKVQILIPNIGYGSNKKTKHML |
Parental | PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE |
PSGFRKFLVHNVKELEVL.MCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTN.NA.LRSEENE | |
Retrocopy | PSGFRKFLVHNVKELEVLQMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNRNAQLRSEENE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |