RetrogeneDB - Parental gene ENSAMEG00000004583 details

							
>ENSAMEG00000004583
ATGGCTGCCCTCAGACCTCTGGTGAAGCCCAAGATCGTTAAAAAGAGGACCAAGAAGTTCATCCGGCACCAATCAGACCG

TTATGTCAAAATTAAGGTACGTATGGTCCTGGGCAAAGACACTAACCCTCCTGTGTTTATTCAGCGCAACTGGCGGAAAC

CCAGGGGCATTGACAATAGGGTGCGCAGAAGATTCAAGGGCCAGATCTTGATGCCCAACATTGGTTACGGGAGCAACAAG

AAAACAAAGCACATGCTGCCCAGTGGCTTCCGGAAGTTCCTGGTCCACAATGTCAAGGAGCTTGAAGTGCTGCTGATGTG

CAACAAATCTTACTGTGCAGAGATTGCTCACAATGTTTCCTCCAAGAATCGCAAATCCATTGTGGAAAGAGCAGCCCAGC

TGGCAATCAGAGTCACCAATCCCAATGCCAGGCTGCGCAGCGAAGAAAATGAA

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000014763	ortholog_one2many	3 retrogenes	retro_acar_104, retro_acar_125, retro_acar_67,
Bos taurus	ENSBTAG00000015283	ortholog_one2one	10 retrogenes	retro_btau_1102, retro_btau_1391, retro_btau_1568, retro_btau_1645, retro_btau_1728, retro_btau_1764, retro_btau_377, retro_btau_623, retro_btau_631, retro_btau_654,
Choloepus hoffmanni	ENSCHOG00000013534	ortholog_one2one	27 retrogenes	retro_chof_1131, retro_chof_1164, retro_chof_1181, retro_chof_1234, retro_chof_1461, retro_chof_152, retro_chof_1821, retro_chof_1957, retro_chof_2022, retro_chof_205, retro_chof_2090, retro_chof_2146, retro_chof_2242, retro_chof_2265, retro_chof_2301, retro_chof_2410, retro_chof_2509, retro_chof_2527, retro_chof_2606, retro_chof_276, retro_chof_286, retro_chof_313, retro_chof_554, retro_chof_585, retro_chof_607, retro_chof_758, retro_chof_913,
Cavia porcellus	ENSCPOG00000019967	possible_ortholog	2 retrogenes	retro_cpor_1241, retro_cpor_608,
Dipodomys ordii	ENSDORG00000008426	possible_ortholog	6 retrogenes	retro_dord_175, retro_dord_251, retro_dord_371, retro_dord_458, retro_dord_522, retro_dord_664,
Equus caballus	ENSECAG00000007201	ortholog_one2one	4 retrogenes	retro_ecab_1115, retro_ecab_26, retro_ecab_369, retro_ecab_698,
Erinaceus europaeus	ENSEEUG00000011609	possible_ortholog	5 retrogenes	retro_eeur_161, retro_eeur_247, retro_eeur_300, retro_eeur_39, retro_eeur_576,
Felis catus	ENSFCAG00000030450	possible_ortholog	38 retrogenes	retro_fcat_1014, retro_fcat_1063, retro_fcat_1173, retro_fcat_1185, retro_fcat_1186, retro_fcat_1340, retro_fcat_1402, retro_fcat_144, retro_fcat_1515, retro_fcat_1526, retro_fcat_16, retro_fcat_1600, retro_fcat_1620, retro_fcat_1665, retro_fcat_1674, retro_fcat_1779, retro_fcat_1819, retro_fcat_1847, retro_fcat_1857, retro_fcat_1863, retro_fcat_191, retro_fcat_1912, retro_fcat_1981, retro_fcat_319, retro_fcat_357, retro_fcat_412, retro_fcat_435, retro_fcat_438, retro_fcat_499, retro_fcat_510, retro_fcat_660, retro_fcat_740, retro_fcat_745, retro_fcat_893, retro_fcat_936, retro_fcat_95, retro_fcat_979, retro_fcat_997,
Homo sapiens	ENSG00000144713	possible_ortholog	20 retrogenes	retro_hsap_1013, retro_hsap_1115, retro_hsap_1547, retro_hsap_1789, retro_hsap_1956, retro_hsap_2618, retro_hsap_2821, retro_hsap_2891, retro_hsap_3024, retro_hsap_3450, retro_hsap_3536, retro_hsap_3582, retro_hsap_3726, retro_hsap_3805, retro_hsap_3936, retro_hsap_3982, retro_hsap_4008, retro_hsap_4155, retro_hsap_4677, retro_hsap_814,
Loxodonta africana	ENSLAFG00000032737	possible_ortholog	1 retrogene	retro_lafr_14,
Myotis lucifugus	ENSMLUG00000022528	possible_ortholog	6 retrogenes	retro_mluc_100, retro_mluc_1283, retro_mluc_173, retro_mluc_2224, retro_mluc_2256, retro_mluc_48,
Macaca mulatta	ENSMMUG00000001340	possible_ortholog	6 retrogenes	retro_mmul_106, retro_mmul_117, retro_mmul_126, retro_mmul_79, retro_mmul_93, retro_mmul_95,
Mustela putorius furo	ENSMPUG00000017189	possible_ortholog	4 retrogenes	retro_mputfur_121, retro_mputfur_76, retro_mputfur_8, retro_mputfur_85,
Mus musculus	ENSMUSG00000057841	possible_ortholog	16 retrogenes	retro_mmus_1132, retro_mmus_1142, retro_mmus_1746, retro_mmus_2010, retro_mmus_2263, retro_mmus_2316, retro_mmus_2341, retro_mmus_2699, retro_mmus_3099, retro_mmus_3378, retro_mmus_3605, retro_mmus_385, retro_mmus_442, retro_mmus_496, retro_mmus_533, retro_mmus_985,
Nomascus leucogenys	ENSNLEG00000004789	possible_ortholog	12 retrogenes	retro_nleu_1109, retro_nleu_125, retro_nleu_1452, retro_nleu_1642, retro_nleu_193, retro_nleu_224, retro_nleu_2808, retro_nleu_2809, retro_nleu_442, retro_nleu_497, retro_nleu_56, retro_nleu_603,
Otolemur garnettii	ENSOGAG00000028498	possible_ortholog	24 retrogenes	retro_ogar_129, retro_ogar_1321, retro_ogar_1340, retro_ogar_1360, retro_ogar_1425, retro_ogar_1524, retro_ogar_160, retro_ogar_1683, retro_ogar_1766, retro_ogar_1833, retro_ogar_2032, retro_ogar_2412, retro_ogar_2416, retro_ogar_2515, retro_ogar_3247, retro_ogar_3384, retro_ogar_545, retro_ogar_56, retro_ogar_571, retro_ogar_776, retro_ogar_870, retro_ogar_891, retro_ogar_924, retro_ogar_973,
Pongo abelii	ENSPPYG00000013391	possible_ortholog	2 retrogenes	retro_pabe_135, retro_pabe_98,
Rattus norvegicus	ENSRNOG00000010746	possible_ortholog	4 retrogenes	retro_rnor_179, retro_rnor_27, retro_rnor_278, retro_rnor_327,
Sarcophilus harrisii	ENSSHAG00000012782	ortholog_one2many	1 retrogene	retro_shar_580,
Sus scrofa	ENSSSCG00000027637	possible_ortholog	9 retrogenes	retro_sscr_1001, retro_sscr_1054, retro_sscr_107, retro_sscr_1081, retro_sscr_165, retro_sscr_76, retro_sscr_793, retro_sscr_957, retro_sscr_989,
Ictidomys tridecemlineatus	ENSSTOG00000026505	possible_ortholog	9 retrogenes	retro_itri_1294, retro_itri_1322, retro_itri_1465, retro_itri_1639, retro_itri_1715, retro_itri_1748, retro_itri_370, retro_itri_885, retro_itri_948,
Tupaia belangeri	ENSTBEG00000012875	possible_ortholog	3 retrogenes	retro_tbel_3304, retro_tbel_47, retro_tbel_51,
Vicugna pacos	ENSVPAG00000002594	possible_ortholog	1 retrogene	retro_vpac_17,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_amel_13	69.63	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_amel_44	80.47	94.81	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_amel_71	75.56	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_amel_112	75.56	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_amel_150	78.68	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_amel_168	68.35	99.26	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_amel_274	74.26	99.26	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_amel_275	79.26	100.00	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_amel_573	64.06	94.07	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_amel_658	73.13	99.26	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_amel_776	77.94	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_amel_781	77.31	88.15	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_amel_871	71.94	100.00	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_amel_892	72.82	76.30	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_amel_923	83.09	100.00	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_amel_1004	72.65	85.93	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_amel_1041	73.33	75.56	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_amel_1059	72.06	100.00	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_amel_1274	90.44	100.00	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_amel_1284	71.76	97.04	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_amel_1394	74.45	100.00	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_amel_1450	71.32	100.00	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_amel_1651	65.25	86.67	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_amel_1766	76.30	100.00	Please wait, loading	Please wait, loading	Please wait, loading
25.	retro_amel_1827	75.37	99.26	Please wait, loading	Please wait, loading	Please wait, loading
26.	retro_amel_1897	70.37	99.26	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSAMEG00000004583 retrocopies

Parental gene:	ENSAMEG00000004583
Aliases:	None
Description:	None
Organism:	*Panda (Ailuropoda melanoleuca)*
Coordinates:	GL192818.1:679521..683266(+)

Parental gene:

ENSAMEG00000004583