RetrogeneDB ID: | retro_tbel_3304 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_136818:155828..156175(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL32 | ||
Ensembl ID: | ENSTBEG00000012875 | ||
Aliases: | None | ||
Description: | ribosomal protein L32 [Source:HGNC Symbol;Acc:10336] |
Percent Identity: | 71.07 % |
Parental protein coverage: | 87.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAALR-PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIG-YGSNKK-TK |
MAALR.PL..P....KR........S...V....NWRKPRGID.RVRRRFKGQILMPNIG.....KK.TK | |
Retrocopy | MAALR>PL*NPRS-SKRGPRSSSGTSKTAVSKLSNWRKPRGIDSRVRRRFKGQILMPNIG<FRQHKK<TK |
Parental | HMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQL |
H.LPSGFRKFLVHN.KE.EV.LMCNKSYCAEI.HNV.SKNRKAIVERAAQL | |
Retrocopy | HVLPSGFRKFLVHNGKEVEVSLMCNKSYCAEITHNV-SKNRKAIVERAAQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |