RetrogeneDB ID: | retro_etel_1391 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_258166:209..505(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL18 | ||
Ensembl ID: | ENSETEG00000013157 | ||
Aliases: | None | ||
Description: | ribosomal protein L18 [Source:HGNC Symbol;Acc:10310] |
Percent Identity: | 74. % |
Parental protein coverage: | 52.66 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | DVRCQEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALDSPK-GCGTVLLSGPRKGREVYRHFGKAPG |
.VR.QEVPKL.VCALRVSS...............FDQLALDSPK.G.GTVL.SGPRKGREVYRHFGKAPG | |
Retrocopy | EVRVQEVPKLEVCALRVSSXXXXXXXXXXXXXXXFDQLALDSPK<GYGTVLQSGPRKGREVYRHFGKAPG |
Parental | TPHSHTKPYVRSKGRKFERARGRRASRGYK |
TPHSHTKPYV.SKG.KF.RARG..ASRGYK | |
Retrocopy | TPHSHTKPYVHSKGQKFQRARG*YASRGYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |