RetrogeneDB ID: | retro_etel_1715 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_289438:40728..41025(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL18 | ||
Ensembl ID: | ENSETEG00000013157 | ||
Aliases: | None | ||
Description: | ribosomal protein L18 [Source:HGNC Symbol;Acc:10310] |
Percent Identity: | 84. % |
Parental protein coverage: | 53.19 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | DVRCQEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGT |
DVR.QEVPKLKVCAL.VSSRA.S.ILK..GKILTFDQL..DS..GCGTVLLSGP.KGREVYRHFGKAPGT | |
Retrocopy | DVRVQEVPKLKVCALQVSSRAMS-ILKVRGKILTFDQLVPDSLRGCGTVLLSGPCKGREVYRHFGKAPGT |
Parental | PHSHTKPYVRSKGRKFERARGRRASRGYKN |
.HSHTKPYVRSK.R.FE.ARGR.ASRGYKN | |
Retrocopy | LHSHTKPYVRSKCREFEHARGRCASRGYKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |