RetrogeneDB ID: | retro_ggor_1453 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 19:49859991..49860349(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DUT | ||
Ensembl ID: | ENSGGOG00000005658 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.89 % |
Parental protein coverage: | 60.71 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | AGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYG-RVAPRSGLAAKHFIDIGAGVIDEDYRGNVGVVLF |
AGY.LYSA.DYT.PPMEKA.VKTDIQ..LPSGCYG.RVAPRSGLAAKHF.D.GAGV.DEDYRGNVGVVLF | |
Retrocopy | AGYYLYSACDYTPPPMEKALVKTDIQTTLPSGCYG<RVAPRSGLAAKHFVDVGAGVTDEDYRGNVGVVLF |
Parental | NFGKEKFEV-KKGDRIAQLICERI-FYPEIQEVQALDDTERGSGGFGSTGKN |
NF.KEKFEV.KKGDRIAQLICERI.F.PEI.EVQALDDT.RGSGGFGSTGKN | |
Retrocopy | NFCKEKFEV>KKGDRIAQLICERI>FNPEIEEVQALDDTKRGSGGFGSTGKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 23 .21 RPM |
SRP007412_cerebellum | 0 .08 RPM | 25 .49 RPM |
SRP007412_heart | 0 .03 RPM | 8 .63 RPM |
SRP007412_kidney | 0 .00 RPM | 29 .56 RPM |
SRP007412_liver | 0 .03 RPM | 16 .12 RPM |
SRP007412_testis | 0 .10 RPM | 32 .63 RPM |