RetrogeneDB ID: | retro_ggor_2053 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 4:107194858..107195172(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DUT | ||
Ensembl ID: | ENSGGOG00000005658 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.04 % |
Parental protein coverage: | 60.45 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SGSAMPCSEEIPAIS-PSKRARPAEEGGMQLRFARLSEHATFPNERRGSTRVNRFSLITAYDYTIPPMEK |
SGS.MPCSEE.PAIS.P.....PAEE.GMQ..FA.L..H........GST......L..AY.YTI.PM.K | |
Retrocopy | SGSTMPCSEETPAIS<PQEAGQPAEESGMQPHFAWLPKHTA--DSTQGSTGTTDYDLYSAYYYTILPMDK |
Parental | AVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDIGAGVI |
..VKTDIQI.L.SGCYG.VA..SGLAAKHFID.GAGVI | |
Retrocopy | VLVKTDIQICLASGCYGIVALWSGLAAKHFIDVGAGVI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 23 .21 RPM |
SRP007412_cerebellum | 0 .00 RPM | 25 .49 RPM |
SRP007412_heart | 0 .00 RPM | 8 .63 RPM |
SRP007412_kidney | 0 .00 RPM | 29 .56 RPM |
SRP007412_liver | 0 .00 RPM | 16 .12 RPM |
SRP007412_testis | 0 .00 RPM | 32 .63 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_2963 |