RetrogeneDB ID: | retro_tsyr_215 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_5432:74299..74783(+) | ||
Located in intron of: | ENSTSYG00000007595 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DUT | ||
Ensembl ID: | ENSTSYG00000012669 | ||
Aliases: | None | ||
Description: | deoxyuridine triphosphatase [Source:HGNC Symbol;Acc:3078] |
Percent Identity: | 71.95 % |
Parental protein coverage: | 63.82 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | ETPAISPSKRPRPAKEGGMQLRFARLSEHASAPTRGSA---RAAGYDLYSAYDYTIPPMEKALVKTDIQI |
ETPA.SPSKRP.PAKEG.MQ..FA.L.E...A...G......AAG.D.Y.AYD.T.PP.EKALVK.D.Q. | |
Retrocopy | ETPAVSPSKRPWPAKEGIMQFPFAWLLEPTLACLGGPCWPVQAAGCDVYGAYDDTLPPVEKALVKADVQG |
Parental | ALPSGCYGRVAPRSGLAAKHFIDVGA-VIDEDYRGNV-GVLFNFGKEEFEVKKGDRIAQLICERI-FYPE |
ALPSGCYGRVAP.SGLAAK.F..VGA.V.DED.RGNV.GVLFNFGK..FE.KKGDR.AQLICE.I.FYPE | |
Retrocopy | ALPSGCYGRVAPCSGLAAKYFLEVGACVLDED*RGNVGGVLFNFGKGKFELKKGDRLAQLICEQI<FYPE |
Parental | -IEEVQVLDDTERGAGGFGSTGKN |
.IEEVQVLDDTERGAGGF.S.G.N | |
Retrocopy | <IEEVQVLDDTERGAGGFVSIGNN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |