RetrogeneDB ID: | retro_tsyr_1044 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_28685:3823..4283(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DUT | ||
Ensembl ID: | ENSTSYG00000012669 | ||
Aliases: | None | ||
Description: | deoxyuridine triphosphatase [Source:HGNC Symbol;Acc:3078] |
Percent Identity: | 74.05 % |
Parental protein coverage: | 61.79 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | AISPSKRPRPAKEGGMQLRFARLSE-HASAPTRGSARAAGYDLYSAY-DYTIPPMEKALVKTDIQIALPS |
AISPS.R......GG.QLR..R.S...A.APTRGS..A.G.DL.SA...YTIPPMEKALVKT.IQIAL.S | |
Retrocopy | AISPSRRSEEG--GGLQLRSLRFSHASALAPTRGSSLAMG*DLHSAV<EYTIPPMEKALVKTNIQIALSS |
Parental | GCY-GRVAPRSGLAAKHFIDVG-AVIDEDYRGNVG-VLFNFGKEEFEVKKGDRIAQLICERIF-YPEIEE |
GCY.GRVAPRSGLAAKHFID.G..VIDEDYRGN...VLFNFGK..FEVKK.D.IAQLICERIF..PEIE. | |
Retrocopy | GCY>GRVAPRSGLAAKHFIDAGIGVIDEDYRGNADVVLFNFGKKKFEVKKRDQIAQLICERIF>NPEIEK |
Parental | VQVLDDTERGAGGFGSTG |
VQVLDDTE.G.GGFGSTG | |
Retrocopy | VQVLDDTEKGSGGFGSTG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |