Parental gene: | DUT, ENSDNOG00000024791 |
| Aliases: | None |
| Description: | deoxyuridine triphosphatase [Source:HGNC Symbol;Acc:3078] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_628:107905..132109(+) |
>ENSDNOG00000024791
ATGAATTCCCTCTGCCCTAGCCTCGCGCTCGGCTACTATTTCCTTCCGTGTCTCCACTCAGTGTTTTTTAAAGACGGGCG
AAGCGCACGGCCCGGAGTCCAGGCCGCGGGAGATTCCGGGCCAGGCCCGCCGCCCAGCCCCGGCATCATGCTGCTGGGGG
CGCTCCGGCCGCTATCCAGCGCTCGCCTTTTGAGCCGAGGCTGCAGTGGAGGCAGTGAAGTCGGGGATCCAAGCAGGAGG
GGTGCGCTTTCTAAGAGGTTGGGATGCAGCTCGCTGGGCCCGAAGACCCCCGCCATTTCCCCCAGTAAGCGGGCCCGGTC
TGCGGAGGAGGGCGGCGTGCGGATCCGCTTTGTTCGGCTTTCGGAGCATGCCACGGCCCCGACCAAGGGGTCCGCGCGAG
CCGCGGGCTTTGACCTGTACAGTGCCTATGATTATACAATACCACCCATGGAGAAAGCCCTTGTGAAAACAGACATTCAG
ATAGCCCTTCCTTCTGGATGTTATGGAAGAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TGGTGTCATAGATGAAGATTATAGAGGAAATGTCGGTGTTGTGCTTTTTAATTTTGGTAAAGAAAAGTTTGAAGTGAAAA
AGGGTGATCGAATTGCACAGCTGATTTGTGAACGGATTTTTTATCCAGAAATAGAGGAAGTTCAGGTTTTGGATGTCACT
GAAAGGGGTTCAGGAGGTTTTGGGTCTACCGGAAAGAATTAA
ATGAATTCCCTCTGCCCTAGCCTCGCGCTCGGCTACTATTTCCTTCCGTGTCTCCACTCAGTGTTTTTTAAAGACGGGCG
AAGCGCACGGCCCGGAGTCCAGGCCGCGGGAGATTCCGGGCCAGGCCCGCCGCCCAGCCCCGGCATCATGCTGCTGGGGG
CGCTCCGGCCGCTATCCAGCGCTCGCCTTTTGAGCCGAGGCTGCAGTGGAGGCAGTGAAGTCGGGGATCCAAGCAGGAGG
GGTGCGCTTTCTAAGAGGTTGGGATGCAGCTCGCTGGGCCCGAAGACCCCCGCCATTTCCCCCAGTAAGCGGGCCCGGTC
TGCGGAGGAGGGCGGCGTGCGGATCCGCTTTGTTCGGCTTTCGGAGCATGCCACGGCCCCGACCAAGGGGTCCGCGCGAG
CCGCGGGCTTTGACCTGTACAGTGCCTATGATTATACAATACCACCCATGGAGAAAGCCCTTGTGAAAACAGACATTCAG
ATAGCCCTTCCTTCTGGATGTTATGGAAGAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TGGTGTCATAGATGAAGATTATAGAGGAAATGTCGGTGTTGTGCTTTTTAATTTTGGTAAAGAAAAGTTTGAAGTGAAAA
AGGGTGATCGAATTGCACAGCTGATTTGTGAACGGATTTTTTATCCAGAAATAGAGGAAGTTCAGGTTTTGGATGTCACT
GAAAGGGGTTCAGGAGGTTTTGGGTCTACCGGAAAGAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 32 .87 RPM |
| SRP012922_cerebellum | 13 .06 RPM |
| SRP012922_heart | 10 .44 RPM |
| SRP012922_kidney | 23 .27 RPM |
| SRP012922_liver | 3 .41 RPM |
| SRP012922_lung | 14 .36 RPM |
| SRP012922_quadricep_muscle | 7 .44 RPM |
| SRP012922_spleen | 73 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001873 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000011998 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001813 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000010560 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000015971 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000015350 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000128951 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005658 | ortholog_one2one | 5 retrogenes | |
| Macropus eugenii | ENSMEUG00000006318 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006842 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000016898 | ortholog_one2one | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000002687 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005996 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003862 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000028847 | ortholog_one2one | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000006454 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007044 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000007221 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000026096 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000007811 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012669 | ortholog_one2one | 9 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015422 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000004723 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_204 | 73.65 | 66.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_225 | 75.84 | 58.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_528 | 83.75 | 62.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_639 | 72.99 | 54.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2096 | 61.68 | 66.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_2230 | 60.31 | 50.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_2270 | 81.37 | 62.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_2608 | 75.91 | 53.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000024791 retrocopies