RetrogeneDB ID: | retro_ogar_2815 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873667.1:1404564..1405032(+) | ||
Located in intron of: | ENSOGAG00000002544 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DUT | ||
Ensembl ID: | ENSOGAG00000028847 | ||
Aliases: | None | ||
Description: | deoxyuridine triphosphatase [Source:HGNC Symbol;Acc:3078] |
Percent Identity: | 67.9 % |
Parental protein coverage: | 76.81 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | EAAAEPVSKRARTEEKGSIQLRFARLSEHAT-APSRGSARAAG-YDLYSAYDYTIPPMEK-AIVKTDIQI |
EA.....SK.AR..EKG..Q..FA.LSEHA..APS.GS.RAAG..DLYSAYDYT.PPMEK.AIVKTDIQ. | |
Retrocopy | EALIVSPSKWARPQEKGNMQFSFAWLSEHAM<APSWGSTRAAG<QDLYSAYDYTRPPMEK<AIVKTDIQT |
Parental | ALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEI |
ALPSGC.G.VAP.SGLA.KHF.DVGAGVIDEDYRGN.G..LFNF..E.FE....D....L.....F.PEI | |
Retrocopy | ALPSGC*GKVAPCSGLAEKHFTDVGAGVIDEDYRGNAGAILFNFDRE*FEER*SDCTVHL*TD--FHPEI |
Parental | EEVQVLDDTERGSGGFGSTGKN |
.EVQ.LDD.ERGS.GFGS.GKN | |
Retrocopy | KEVQILDDSERGSRGFGSPGKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |