RetrogeneDB ID: | retro_itri_1134 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393383.1:1275979..1276228(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000014322 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 56.32 % |
Parental protein coverage: | 58.33 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEA-PPFVRFVTKINMNGVNSSNGV-VDPRA-ISVLAKWQ |
TR.T..I...P..I.EN.IYS.......K.PEA...FVRFVTKINMNGVNS.N.V.VDPR...SVL.K.Q | |
Retrocopy | TRRTWIIVRSPTPIDENQIYSTNTDRRLKCPEA<SSFVRFVTKINMNGVNSCN*V<VDPRT<LSVLTKGQ |
Parental | NSYSIKVVLQELRRLMM |
.S..I.VVLQ.L..L.. | |
Retrocopy | ISHRIRVVLQGLWCLVL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |