RetrogeneDB ID: | retro_nleu_639 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397269.1:20609865..20610801(+) | ||
Located in intron of: | ENSNLEG00000004265 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSNLEG00000017732 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 91.35 % |
Parental protein coverage: | 72.56 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | KGPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLAADDFRVKYETELAMRQSVENDIHGLRKV |
KGPQVRDWSHYFK.I.DLRAQIF.NTVDNA.IVLQIDNA.LAADDFR.KYETELAM.QSVENDIHGL.KV | |
Retrocopy | KGPQVRDWSHYFKTIKDLRAQIFSNTVDNAHIVLQIDNAHLAADDFRIKYETELAMCQSVENDIHGLCKV |
Parental | IDDTNVTRLQLETEIEALKEELLFMKKNHEEEVKGLQAQIASSGLTVEVDAPKSQDLAKIMADIRAQYDE |
IDDTNVTRLQLETEIEALKEELLF.KKNHEEEVKGLQAQIASSGLT.EVDAPKS.DLAKIMADIRAQYDE | |
Retrocopy | IDDTNVTRLQLETEIEALKEELLFRKKNHEEEVKGLQAQIASSGLTMEVDAPKS*DLAKIMADIRAQYDE |
Parental | LARKNREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELRRTVQSLEIDLDSMRNLKASLENSLREVE |
LA.KN.EELDKYWSQQIEESTTVVTTQSAEVGAAE..LTELR.TVQSLEIDLDSMRN.KASLENSLREVE | |
Retrocopy | LAQKN*EELDKYWSQQIEESTTVVTTQSAEVGAAEMPLTELRHTVQSLEIDLDSMRNVKASLENSLREVE |
Parental | ARYALQMEQLNGILLHLESELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNLGDALDS |
ARY.LQMEQLNGILLHLESELA...AEGQ.QAQEYEALLNIKVKLEAEIATY.RLLE.GEDFNLGDALDS | |
Retrocopy | ARYTLQMEQLNGILLHLESELALIQAEGQHQAQEYEALLNIKVKLEAEIATYHRLLEGGEDFNLGDALDS |
Parental | SNSMQTIQKTTTRRIVDGKVVSETNDTKVLRH |
SNS.QTIQKTTT..IVDGKVVSETNDTKVLRH | |
Retrocopy | SNSTQTIQKTTTCQIVDGKVVSETNDTKVLRH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |