Parental gene:

KRT18, ENSMEUG00000012262

Aliases:None
Description:keratin 18 [Source:HGNC Symbol;Acc:6430]
Organism:Wallaby (Macropus eugenii)
Coordinates:Scaffold91867:47..2317(-)


>ENSMEUG00000012262
ATTTATGCAAGCTCAGTGGACAATGCCAGAATCACCCTACAGATCGATAATGCCCGTCTGGCGGCTGATGACTTCAGAAT
CAAGTATGAAGCAGAGCTGGCCATGAGACAGTCTGTAGAAAGAGACATTCATGACCTCCGGAAGGTCATTGATGACACCA
ACGTGACCAGGCTGCAACTGGAGACTGAGATTGAAAACTTGAAGGAAGAGCTACTTTTTATGAGGAAGAACCATGAGGAG
GAGGTGAATTCTCTACAAGCCCAAATCGCAGGCTGTGGGCTGACCGTGGAGGTGGATTCTCCCAAATCGCAGGACTTGAG
CAAAGTCATGGCTGATATCCGAGCCCAATACGACGCTCTGGCTCAGAAGAACAGAGAGGAGCTTGATAAATACTGGTCAC
AGCAGATTGAAGAGAGCACCGTGACAATCAACACGAGATCTGAGGAGGTGGAAGCAGCTCGAAACACTGTCACTGAGCTG
AAACGGACAGTCCAGTCCCTTGAGATTGACCTGGATTCCCTGCGAAATTTAAAAACCAGCTTGGAGGACAGCCTGAGGGA
GGTGGAGACCCGATATGCTATCCAGATGGAGCAGATCAACACAGCCCTGCTACACCTGGAAGCAGAGCTGGGGCAAACAC
GAACAGAGGGGCAGCGCCACGCCCAGGAATACCAGGCCCTGCTCAACATTAAGGACAAACTGGAAGCAGAGATCAACACC
TATCGAAACCTGCTAGAGAATGGGGGGGAGGACTTC

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011981 ortholog_one2many 2 retrogenes
Canis familiaris ENSCAFG00000007154 ortholog_one2many 10 retrogenes
Callithrix jacchus ENSCJAG00000018165 ortholog_one2many 29 retrogenes
Cavia porcellus ENSCPOG00000002618 ortholog_one2many 1 retrogene
Echinops telfairi ENSETEG00000008130 ortholog_one2one 1 retrogene
Homo sapiens ENSG00000111057 ortholog_one2one 60 retrogenes
Gorilla gorilla ENSGGOG00000010157 ortholog_one2many 28 retrogenes
Myotis lucifugus ENSMLUG00000022439 ortholog_one2many 8 retrogenes
Macaca mulatta ENSMMUG00000031911 ortholog_one2many 4 retrogenes
Mustela putorius furo ENSMPUG00000006369 ortholog_one2many 2 retrogenes
Mus musculus ENSMUSG00000023043 ortholog_one2one 2 retrogenes
Nomascus leucogenys ENSNLEG00000017732 ortholog_one2one 45 retrogenes
Oryctolagus cuniculus ENSOCUG00000027691 ortholog_one2many 1 retrogene
Pongo abelii ENSPPYG00000004563 ortholog_one2many 60 retrogenes
Pan troglodytes ENSPTRG00000004996 ortholog_one2one 58 retrogenes
Pteropus vampyrus ENSPVAG00000009361 ortholog_one2one 2 retrogenes
Rattus norvegicus ENSRNOG00000047393 ortholog_one2many 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000015587 ortholog_one2one 3 retrogenes
Tursiops truncatus ENSTTRG00000012977 ortholog_one2one 2 retrogenes
Vicugna pacos ENSVPAG00000007421 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_323 84.02 76.98
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2. retro_meug_425 75.00 76.98
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3. retro_meug_575 100.00 100.00
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4. retro_meug_771 88.46 51.19
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5. retro_meug_1392 69.92 51.98
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6. retro_meug_1430 88.69 87.30
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7. retro_meug_1461 72.87 50.40
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8. retro_meug_1467 68.85 70.63
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9. retro_meug_1631 79.89 71.03
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10. retro_meug_1651 75.11 93.25
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11. retro_meug_1810 80.95 100.00
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12. retro_meug_2024 81.01 71.03
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13. retro_meug_2082 58.11 86.51
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14. retro_meug_2132 80.75 63.49
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Download FASTA sequences of all ENSMEUG00000012262 retrocopies