RetrogeneDB ID: | retro_mluc_1248 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429809:1743742..1744491(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000022439 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 63.98 % |
Parental protein coverage: | 57.88 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | DNMSFSTRSSFSS-NYRTLGSVQAPSYRV-RPTSSAASVYAGAGGSGSR-ISVSHSTSVRSGWGAGGLAA |
.NM.F...S.FS..NY.TL.S...PS.....P.SS.A..YA.A.GS..R.ISVSH.T...S.W...GLA. | |
Retrocopy | NNMIFRNFSRFST<NYWTLASM*LPSHWT<QPASSMAINYADARGSAFR<ISVSHFT---SMWS--GLAS |
Parental | GMAGGLAGIGGIQSEKETMQGLNDRLASYL-ERVRSLEADNRRLEIKIREHLEKKGPQVRDWGHYFKTIE |
.MAGG.AGIG.IQ.E.E.MQ.L.D.LASYL...VRSLE.DN.RL..KI.EHLE.K.PQVRD.GHYFKTIE | |
Retrocopy | EMAGGPAGIGWIQNE-EIMQCLDDYLASYL<KMVRSLETDNWRLDNKIWEHLEEKRPQVRD*GHYFKTIE |
Parental | DLRAQIFASSVDNARIVLQIDNARLAADDFRVKYETELAMRQSVESDINGLRKVIDDTNITRLQLETEIE |
DLRAQIF.S.V..A..VLQIDNA.LAADDFRVKYE.ELAM..SVE.DINGL.KV.DDTNITRL.LETEI. | |
Retrocopy | DLRAQIFVSFVRHAHMVLQIDNACLAADDFRVKYEKELAMCWSVEGDINGL*KVTDDTNITRLPLETEIK |
Parental | ALKEELIFMKKNHEEGRKKYKEQVCRRRVRVKLDAPKSQDLSKIMADIRAQ |
ALK..L.FMKKNHEE.......Q.......V.LDAPKSQD.S..M.DI.AQ | |
Retrocopy | ALKKGLLFMKKNHEEEVNGLQKQITNSGLTVELDAPKSQDFSMTMVDIWAQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |