Parental gene:

ENSMMUG00000031911

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:50014161..50018234(+)


>ENSMMUG00000031911
ATGAGCTTCACCACTCGCTCCACCTTCTCTACCAACTACCGGTCCCTGGGCTCTGTCCAGGCGCCCAGCTACGGCGCCCG
GCCGGTCAGCAGCGCGGCCAGTGTCTATGCAGGCGCCGGAGGTTCTGGTTCCCGGATCTCCGTGTCCCGCTCCACCAGCT
TCCGGGGCGGCATGGGGTCCGGGGGCCTGGCCTCAGGGATGGCCGGGGGTCTGGCAGGAATGGGAGGCATCCAGAATGAG
AAGGAGACCATGCAAAGCCTGAACGACCGCCTGGCCTCTTACCTGGACAGAGTGAGGAGCCTGGAGACCGAGAACCGGAG
GCTGGAGAGCAAAATCCGGGAGCACTTGGAGAAGAAGGGACCCCAGGTCAGAGACTGGAGCCATTACTTCAAGATCATCG
AGGACCTGAGGGCTCAGATCTTCGCAAATACTGTGGACAATGCCCGCATCGTTCTGCAGATTGACAATGCCCGTCTTGCT
GCTGATGACTTTAGAGTCAAGTATGAGACAGAGCTGGCCATGCGCCAGTCTGTAGAGAATGACATCCATGGGCTCCGCAA
GGTCATTGATGACACCAATGTCACTCGACTGCAGCTGGAGACAGAGATCGAGGCTCTCAAGGAGGAGCTGCTCTTCATGA
AGAAGAACCACGAAGAGGCAAGCAGGGGCCAGGGCCTACAAGCCCAGATTGCCAGCTCTGGGTTGACCGTGGAGGTAGAT
GCCCCCAAATCTCAGGACCTCGCCAAGATCATGGCAGACATCCGGGCCCAATATGACGAGCTGGCTCGGAAGAACCGAGA
GGAACTAGACAAGTACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCACCACACAGTCCGCCGAGGTTGGAGCTG
CTGAGACGACGCTCACAGAGCTGAGACGTACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATCTGAAGGCC
AGCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTATGCCCTACAGATGGAGCAGCTCAATGGGATCCTGCTGCACCT
GGAGTCAGAGCTGGCACAGACCCGGGCAGAGGGACAGCGACAGGCCCAGGAGTATGAGGCCCTGTTGAACATCAAGGTCA
AGCTGGAAGCTGAGATCGCCACCTACCGCCGCCTGCTGGAAGATGGCGAGGAATTCAATCTTGGTGATGCCTTGGACAGC
AGCAACTCCATGCAAACCATCCAAAAGACCACCACCCGCCGGATAGTGGATGGCAAAGTGGTGTCTGAGACCAACGACAC
CAAAGTTCTGAGGCATTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .34 RPM
SRP007412_brain_prefrontal_cortex 0 .95 RPM
SRP007412_cerebellum 1 .94 RPM
SRP007412_heart 1 .30 RPM
SRP007412_kidney 19 .60 RPM
SRP007412_liver 49 .60 RPM
SRP007412_testis 0 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011981 possible_ortholog 2 retrogenes
Canis familiaris ENSCAFG00000007154 possible_ortholog 10 retrogenes
Callithrix jacchus ENSCJAG00000018165 ortholog_many2many 29 retrogenes
Cavia porcellus ENSCPOG00000002618 possible_ortholog 1 retrogene
Echinops telfairi ENSETEG00000008130 possible_ortholog 1 retrogene
Homo sapiens ENSG00000111057 ortholog_one2many 60 retrogenes
Gorilla gorilla ENSGGOG00000010157 ortholog_one2many 28 retrogenes
Macropus eugenii ENSMEUG00000012262 ortholog_one2many 14 retrogenes
Myotis lucifugus ENSMLUG00000022439 possible_ortholog 8 retrogenes
Mustela putorius furo ENSMPUG00000006369 possible_ortholog 2 retrogenes
Mus musculus ENSMUSG00000023043 possible_ortholog 2 retrogenes
Nomascus leucogenys ENSNLEG00000017732 ortholog_one2many 45 retrogenes
Oryctolagus cuniculus ENSOCUG00000027691 possible_ortholog 1 retrogene
Pongo abelii ENSPPYG00000004563 ortholog_one2many 60 retrogenes
Pan troglodytes ENSPTRG00000004996 ortholog_one2many 58 retrogenes
Pteropus vampyrus ENSPVAG00000009361 possible_ortholog 2 retrogenes
Rattus norvegicus ENSRNOG00000047393 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000015587 possible_ortholog 3 retrogenes
Tursiops truncatus ENSTTRG00000012977 possible_ortholog 2 retrogenes
Vicugna pacos ENSVPAG00000007421 possible_ortholog 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_91 98.84 100.00
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2. retro_mmul_279 93.95 100.00
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3. retro_mmul_948 79.54 100.00
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4. retro_mmul_1601 78.86 93.26
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Download FASTA sequences of all ENSMMUG00000031911 retrocopies