RetrogeneDB ID: | retro_meug_771 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold183809:480..863(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSMEUG00000012262 | ||
Aliases: | None | ||
Description: | keratin 18 [Source:HGNC Symbol;Acc:6430] |
Percent Identity: | 88.46 % |
Parental protein coverage: | 51.19 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | NREELDKYWSQQIEESTVTINTRSEEVEAAR-NTVTELKRTVQSLEIDLDSLRNLKTSLEDSLREVETRY |
NREELDKYWSQQIEESTVTINTRSEE.EAA...T.TELKRTVQSLEIDL.SLRNLKTSLEDSLRE.ETRY | |
Retrocopy | NREELDKYWSQQIEESTVTINTRSEEMEAAK<STLTELKRTVQSLEIDLNSLRNLKTSLEDSLREMETRY |
Parental | AIQMEQINTALLHLEAELGQTRTEGQRHAQEYQALLNIKDKLEAEINTYRNLLENGGEDF |
AIQMEQINTAL.HLEAELGQTRTEGQR.AQEY.ALLNIKD.LE.EIN..RNLLEN.GEDF | |
Retrocopy | AIQMEQINTALPHLEAELGQTRTEGQRQAQEYEALLNIKDQLETEINI*RNLLEN-GEDF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |