RetrogeneDB ID: | retro_meug_1651 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold50958:6583..7288(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSMEUG00000012262 | ||
Aliases: | None | ||
Description: | keratin 18 [Source:HGNC Symbol;Acc:6430] |
Percent Identity: | 75.11 % |
Parental protein coverage: | 93.25 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LQIDNARLAADD-FRIKYEAELAMRQSVERDIHDLRKVIDDTNVTRLQLETEIENLKEELLFMRKN-HEE |
L.IDNARL.ADD..R.KYEAELAMRQ..E.DIH.L.KVIDDT..TRLQL.TEIE.LKEEL.FM.K..HEE | |
Retrocopy | LHIDNARLVADD<LRLKYEAELAMRQPIESDIHGLWKVIDDTIMTRLQL*TEIETLKEELFFMKKT>HEE |
Parental | EVNSLQAQIAGCGLTVEVDSPKSQDLSKVMADIRAQYDALAQKNREELDKYWSQQIEESTVTINTRSEEV |
.VNSLQAQI.G.GLT.EVDSPKSQD.SKVMADI..QYD.LA..N.EEL.KY..QQIEEST...NT.SEEV | |
Retrocopy | KVNSLQAQITGSGLTMEVDSPKSQDWSKVMADIQTQYDSLAHQNKEELHKYLFQQIEESTLAMNTSSEEV |
Parental | EAARNTVTELKRTVQSLEIDLDSLRNLKTSLEDSLREVETRYAIQMEQINTALLHLEAELGQTRTEGQRH |
E.ARNT.T.LK.TV.S.EIDLDSLRNLKTSLEDSLREVET..AIQMEQI.TALLHLEA.LG.T.T.GQ.. | |
Retrocopy | EEARNTATKLKCTVYSQEIDLDSLRNLKTSLEDSLREVETHCAIQMEQISTALLHLEAYLGHTGTKGQCQ |
Parental | AQEYQALLNIKDKLEAEINTYRNLLEN |
AQE..ALLNIK..LEAEINT..N..EN | |
Retrocopy | AQE*KALLNIKIRLEAEINTSPNFQEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |