RetrogeneDB ID: | retro_pvam_887 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_14964:17672..18004(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSPVAG00000002071 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.4 % |
Parental protein coverage: | 57.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | LKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQ-LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKP |
..A.L..LNITAAKEI.V.G..KAI..FVP..Q..KS.QK.QV..V..LE.KFSGKH.V..AQRR.LPK. | |
Retrocopy | IRALLSLLNITAAKEIKVDGSQKAILTFVPILQ<MKSSQKNQVW*VLKLEEKFSGKHIVSNAQRRVLPKL |
Parental | TRKSRTK-NKQKRPRSRTL-TAVHDAILEDLVFPSEIVGKRIRV |
T.K..TK.NKQK.PR..TL.......ILEDLVF.SEI.GKRI.V | |
Retrocopy | TQKNFTK<NKQKYPRNYTL>DSCATVILEDLVFLSEIAGKRIQV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |