RetrogeneDB ID: | retro_shar_716 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL861595.1:140860..141123(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL36 | ||
Ensembl ID: | ENSSHAG00000013492 | ||
Aliases: | None | ||
Description: | ribosomal protein L36 [Source:HGNC Symbol;Acc:13631] |
Percent Identity: | 61.96 % |
Parental protein coverage: | 86.67 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MAIRYPMAVGLNKGHKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSK-DKRA |
MAI.YPMAV.LN...K..KN.SK..HC...G.LTK.TKFVRDM.REVCGF.PYE..AMELLKVSK..KRA | |
Retrocopy | MAI*YPMAVSLNGLTKLPKNISKYHHC---GHLTKDTKFVRDMNREVCGFPPYEWWAMELLKVSK<NKRA |
Parental | LKFIKKRVGTHIRAKRKREELS |
LKF....V.......R.RE..S | |
Retrocopy | LKFXXXXVWELTS*PRRRERRS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |