RetrogeneDB ID: | retro_shar_543 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849876.1:214581..214845(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL36 | ||
Ensembl ID: | ENSSHAG00000013492 | ||
Aliases: | None | ||
Description: | ribosomal protein L36 [Source:HGNC Symbol;Acc:13631] |
Percent Identity: | 58.51 % |
Parental protein coverage: | 86.67 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | HKVTKNVSKPRHCRR-RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKR-VGTHIR |
HKVT.NV....HC....G.LTKH.KF.....R...GF..YE...MELLKVSK.K.A.KF..K...G.HI. | |
Retrocopy | HKVTINV*NL*HCHL>HGCLTKHIKF----VR*KGGFGTYEWYIMELLKVSKHK*AIKFVLKK>MGIHIW |
Parental | AK-RKREELSNVLAAMRKAAAKKD |
.K.RKREELSNVL.A.RKA.AKKD | |
Retrocopy | KK>RKREELSNVLVAIRKAVAKKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |