RetrogeneDB ID: | retro_ogar_2479 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873627.1:19360..19701(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSOGAG00000008163 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 79.31 % |
Parental protein coverage: | 80.42 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KAHLGTALKA-NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEEN |
.AHLGTALK...P.GGASHAK.IVLEKVGVEAKQ.NS.IRKCV.VQLIKN.KKITAF.PN.GCLNFIE.N | |
Retrocopy | EAHLGTALKV<HPLGGASHAKEIVLEKVGVEAKQTNSVIRKCVQVQLIKNSKKITAFIPNNGCLNFIEKN |
Parental | DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS |
..VLVA.FG.KGHAVGDIPGV.....KVANVSLLALYKGKKE.P.S | |
Retrocopy | -KVLVARFGQKGHAVGDIPGVHLQLSKVANVSLLALYKGKKE*PSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |