Parental gene:

CFL1, ENSBTAG00000021455

Aliases:None
Description:Cofilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q5E9F7]
Organism:Cow (Bos taurus)
Coordinates:29:44638895..44642280(-)


>ENSBTAG00000021455
ATGGCCTCCGGTGTGGCTGTCTCTGATGGGGTCATCAAAGTGTTCAACGACATGAAAGTGCGTAAGTCGTCGACACCAGA
GGAAGTGAAGAAGCGCAAGAAGGCGGTGCTCTTCTGCCTGAGTGAGGACAAGAAGAACATCATCCTGGAGGAGGGCAAGG
AGATCCTGGTGGGTGACGTGGGCCAGACGGTAGACGACCCCTATGCCACCTTTGTCAAGATGCTGCCAGACAAGGACTGC
CGCTACGCCCTCTACGATGCAACCTACGAGACCAAGGAGAGCAAGAAGGAGGACCTGGTGTTCATCTTCTGGGCCCCTGA
GTGTGCACCCCTTAAGAGCAAAATGATCTATGCCAGCTCCAAGGACGCCATCAAGAAGAAGCTGACGGGGATCAAGCATG
AATTACAAGCAAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTTGCAGAGAAGCTGGGGGGCAGCGCTGTCATCTCC
CTGGAGGGCAAGCCTTTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 401 .89 RPM
SRP017611_kidney 229 .03 RPM
SRP017611_liver 132 .67 RPM
ERP005899_muscle 525 .67 RPM
ERP005899_liver 62 .58 RPM
SRP030211_testis 128 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015434 within_species_paralog 1 retrogene
retro_btau_880,
Canis familiaris ENSCAFG00000024955 possible_ortholog 6 retrogenes
retro_cfam_1544, retro_cfam_366, retro_cfam_660, retro_cfam_67, retro_cfam_943, retro_cfam_964,
Callithrix jacchus ENSCJAG00000001916 possible_ortholog 1 retrogene
retro_cjac_347,
Felis catus ENSFCAG00000013272 ortholog_one2one 3 retrogenes
retro_fcat_1456, retro_fcat_303, retro_fcat_991,
Microcebus murinus ENSMICG00000012763 ortholog_one2one 1 retrogene
retro_mmur_703,
Myotis lucifugus ENSMLUG00000024685 possible_ortholog 6 retrogenes
retro_mluc_1905, retro_mluc_2114, retro_mluc_216, retro_mluc_2218, retro_mluc_455, retro_mluc_507,
Oryctolagus cuniculus ENSOCUG00000025604 possible_ortholog 4 retrogenes
retro_ocun_1123, retro_ocun_1390, retro_ocun_324, retro_ocun_478,
Otolemur garnettii ENSOGAG00000016503 ortholog_one2one 8 retrogenes
retro_ogar_1442, retro_ogar_1581, retro_ogar_1648, retro_ogar_2192, retro_ogar_302, retro_ogar_405, retro_ogar_453, retro_ogar_828,
Rattus norvegicus ENSRNOG00000020660 possible_ortholog 2 retrogenes
retro_rnor_1354, retro_rnor_693,
Ictidomys tridecemlineatus ENSSTOG00000027968 possible_ortholog 4 retrogenes
retro_itri_144, retro_itri_1456, retro_itri_1734, retro_itri_685,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1382 63.28 75.90
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Download FASTA sequences of all ENSBTAG00000021455 retrocopies