Parental gene: | CFL1, ENSCAFG00000024955 |
| Aliases: | None |
| Description: | cofilin 1 (non-muscle) [Source:HGNC Symbol;Acc:1874] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 18:51406705..51407693(+) |
>ENSCAFG00000024955
CAGGCCTCTGGCGTGGCGGTTTCTGATGGCGTCATCAAAGTGTTCAATGACATGAAGGTGCGTAAGTCTTCAACACCCGA
GGAAGTGAAGAAGCGCAAGAAGGCAGTTCTTTTCTGCCTGAGCGAGGACAAGAAGAACATCATCCTCGAGGAGGGCAAGG
AGATCCTGGTAGGTGATGTGGGCCAGACTGTAGATGACCCCTACGCCACCTTTGTCAAGATGCTACCAGACAAGGACTGC
CGCTATGCCCTCTATGACGCAACCTATGAGACCAAGGAGAGCAAGAAGGAGGACCTGGTGTTTATCTTCTGGGCACCTGA
GTCTGCACCCCTTAAGAGCAAAATGATTTATGCCAGCTCCAAGGATGCCATCAAGAAAAAGCTGACTGGGATCAAGCATG
AGTTACAAGCAAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTGGCAGAGAAACTGGGGGGCAGTGCCGTCATCTCT
CTGGAGGGCAAGCCTTTGTGA
CAGGCCTCTGGCGTGGCGGTTTCTGATGGCGTCATCAAAGTGTTCAATGACATGAAGGTGCGTAAGTCTTCAACACCCGA
GGAAGTGAAGAAGCGCAAGAAGGCAGTTCTTTTCTGCCTGAGCGAGGACAAGAAGAACATCATCCTCGAGGAGGGCAAGG
AGATCCTGGTAGGTGATGTGGGCCAGACTGTAGATGACCCCTACGCCACCTTTGTCAAGATGCTACCAGACAAGGACTGC
CGCTATGCCCTCTATGACGCAACCTATGAGACCAAGGAGAGCAAGAAGGAGGACCTGGTGTTTATCTTCTGGGCACCTGA
GTCTGCACCCCTTAAGAGCAAAATGATTTATGCCAGCTCCAAGGATGCCATCAAGAAAAAGCTGACTGGGATCAAGCATG
AGTTACAAGCAAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTGGCAGAGAAACTGGGGGGCAGTGCCGTCATCTCT
CTGGAGGGCAAGCCTTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 280 .18 RPM |
| SRP017611_kidney | 241 .23 RPM |
| SRP017611_liver | 54 .02 RPM |
| SRP012049_cerebellum | 541 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017334 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000021455 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032562 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001916 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000019900 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000013272 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000172757 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023183 | ortholog_one2one | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000012763 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000024685 | ortholog_one2one | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000019016 | possible_ortholog | 5 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011502 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000056201 | possible_ortholog | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005852 | ortholog_one2one | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000025604 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016503 | possible_ortholog | 8 retrogenes | |
| Pongo abelii | ENSPPYG00000003047 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000003895 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020660 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027968 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000016751 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016931 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_67 | 88.81 | 86.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_366 | 64.71 | 99.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_660 | 54.90 | 91.57 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_943 | 89.70 | 99.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cfam_964 | 94.29 | 84.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cfam_1544 | 82.42 | 98.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000024955 retrocopies