Parental gene:

H3F3B, ENSDNOG00000024843

Aliases:None
Description:H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_40771:1559..2188(-)


>ENSDNOG00000024843
ATGGCCCGAACCAAGCAGACTGCTCGTAAATCCACTGGTGGGAAAGCTCCCCGCAAACAGCTGGCCACTAAGGCTGCCCG
GAAAAGCGCCCCCTCTACCGGCGGGGTGAAGAAACCCCATCGTTACAGGCCCGGAACCGTTGCGCTTCGAGAGATTCGTC
GCTACCAGAAATCCACCGAGCTTCTGATCCGGAAGCTGCCTTTCCAGAGATTGGTGAGGGAGATCGCCCAGGACTTCAAA
ACTGACTTGAGGTTTCAGAGCGCGGCCATTGGTGCGCTTCAGGAGGCTAGCGAAGCATACCTGGTGGGTTTATTTGAAGA
TACTAATCTCTGTGCCATCCACGCTAAGAGAGTCACCATCATGCCCAAAGACATCCAGTTGGCTCGCCGGATACGGGGAG
AGAGAGCTTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 379 .21 RPM
SRP012922_cerebellum 285 .66 RPM
SRP012922_heart 37 .36 RPM
SRP012922_kidney 136 .90 RPM
SRP012922_liver 169 .05 RPM
SRP012922_lung 393 .88 RPM
SRP012922_quadricep_muscle 46 .91 RPM
SRP012922_spleen 426 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012702 possible_ortholog 10 retrogenes
retro_cjac_145, retro_cjac_198, retro_cjac_201, retro_cjac_224, retro_cjac_235, retro_cjac_238, retro_cjac_307, retro_cjac_334, retro_cjac_366, retro_cjac_68,
Equus caballus ENSECAG00000006904 possible_ortholog 1 retrogene
retro_ecab_916,
Equus caballus ENSECAG00000016948 possible_ortholog 1 retrogene
retro_ecab_266,
Homo sapiens ENSG00000132475 ortholog_one2one 11 retrogenes
retro_hsap_1212, retro_hsap_1552, retro_hsap_2180, retro_hsap_24, retro_hsap_2971, retro_hsap_3231, retro_hsap_3294, retro_hsap_3299, retro_hsap_389, retro_hsap_4236, retro_hsap_911,
Latimeria chalumnae ENSLACG00000004118 ortholog_one2one 1 retrogene
retro_lcha_104,
Loxodonta africana ENSLAFG00000008083 ortholog_one2one 3 retrogenes
retro_lafr_837, retro_lafr_959, retro_lafr_99,
Microcebus murinus ENSMICG00000002139 possible_ortholog 2 retrogenes
retro_mmur_36, retro_mmur_371,
Mustela putorius furo ENSMPUG00000004555 ortholog_one2one 4 retrogenes
retro_mputfur_389, retro_mputfur_82, retro_mputfur_99, retro_mputfur_990,
Oreochromis niloticus ENSONIG00000019975 possible_ortholog 5 retrogenes
retro_onil_41, retro_onil_46, retro_onil_56, retro_onil_60, retro_onil_63,
Pongo abelii ENSPPYG00000008636 possible_ortholog 1 retrogene
retro_pabe_2662,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_775 84.29 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_dnov_1624 85.34 85.29
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000024843 retrocopies