Parental gene:

H3F3A, ENSLAFG00000008083

Aliases:None
Description:Histone H3 [Source:UniProtKB/TrEMBL;Acc:G3T157]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_49:6768556..6769180(+)


>ENSLAFG00000008083
ATGGCCCGGACCAAGCAGACTGCCCGCAAGTCTACCGGGGGGAAAGCCCCCCGCAAACAGCTGGCCACCAAGGCAGCCAG
GAAGAGCGCTCCCTCTACCGGCGGGGTGAAGAAACCTCACCGTTACAGGCCCGGAACCGTGGCGCTCCGGGAGATCCGCC
GTTACCAGAAATCGACCGAGCTTCTGATCCGGAAGCTGCCTTTCCAGCGGTTGGTGAGGGAGATCGCCCAGGATTTCAAA
ACGGACTTGAGGTTTCAGAGCGCAGCCATCGGCGCCCTGCAGGAGGCTAGTGAAGCGTACCTGGTGGGGTTATTCGAAGA
CACTAATCTGTGTGCCATCCACGCCAAGAGAGTCACCATCATGCCCAAAGACATCCAGTTGGCTCGCCGGATACGGGGGG
AGAGAGCTTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012702 possible_ortholog 10 retrogenes
retro_cjac_145, retro_cjac_198, retro_cjac_201, retro_cjac_224, retro_cjac_235, retro_cjac_238, retro_cjac_307, retro_cjac_334, retro_cjac_366, retro_cjac_68,
Dasypus novemcinctus ENSDNOG00000024843 ortholog_one2one 2 retrogenes
retro_dnov_1624, retro_dnov_775,
Equus caballus ENSECAG00000006904 possible_ortholog 1 retrogene
retro_ecab_916,
Equus caballus ENSECAG00000016948 possible_ortholog 1 retrogene
retro_ecab_266,
Homo sapiens ENSG00000132475 ortholog_one2one 11 retrogenes
retro_hsap_1212, retro_hsap_1552, retro_hsap_2180, retro_hsap_24, retro_hsap_2971, retro_hsap_3231, retro_hsap_3294, retro_hsap_3299, retro_hsap_389, retro_hsap_4236, retro_hsap_911,
Latimeria chalumnae ENSLACG00000004118 ortholog_one2one 1 retrogene
retro_lcha_104,
Loxodonta africana ENSLAFG00000021624 within_species_paralog 4 retrogenes
retro_lafr_172, retro_lafr_410, retro_lafr_546, retro_lafr_832,
Microcebus murinus ENSMICG00000002139 possible_ortholog 2 retrogenes
retro_mmur_36, retro_mmur_371,
Mustela putorius furo ENSMPUG00000004555 ortholog_one2one 4 retrogenes
retro_mputfur_389, retro_mputfur_82, retro_mputfur_99, retro_mputfur_990,
Oreochromis niloticus ENSONIG00000019975 possible_ortholog 5 retrogenes
retro_onil_41, retro_onil_46, retro_onil_56, retro_onil_60, retro_onil_63,
Pongo abelii ENSPPYG00000008636 possible_ortholog 1 retrogene
retro_pabe_2662,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_99 80.15 100.00
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2. retro_lafr_837 72.26 100.00
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3. retro_lafr_959 75.74 100.00
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Download FASTA sequences of all ENSLAFG00000008083 retrocopies