RetrogeneDB ID: | retro_mputfur_990 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896987.1:242..513(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H3F3B | ||
Ensembl ID: | ENSMPUG00000004555 | ||
Aliases: | None | ||
Description: | H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765] |
Percent Identity: | 71.74 % |
Parental protein coverage: | 66.91 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | APRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR-EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR |
APRKQLATKA...SAPSTG..KKP.RYR.GT.A.R...RR.QKSTEL.IR.LP.QRL..E.AQDF.TDLR | |
Retrocopy | APRKQLATKATCQSAPSTGEMKKPRRYRLGTAARR>QRRR*QKSTEL-IRRLPLQRLAQEVAQDFRTDLR |
Parental | FQSAAIGALQEASEAYLVGLFE |
FQ.AA.GA.QEASEA.L..LFE | |
Retrocopy | FQRAAVGAWQEASEASLEVLFE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000012702 | 10 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000024843 | 2 retrocopies | |
Equus caballus | ENSECAG00000006904 | 1 retrocopy | |
Equus caballus | ENSECAG00000016948 | 1 retrocopy | |
Homo sapiens | ENSG00000132475 | 11 retrocopies | |
Latimeria chalumnae | ENSLACG00000004118 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000008083 | 3 retrocopies | |
Microcebus murinus | ENSMICG00000002139 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000004555 | 4 retrocopies | |
Mustela putorius furo | ENSMPUG00000013811 | 3 retrocopies | |
Oreochromis niloticus | ENSONIG00000019975 | 5 retrocopies | |
Pongo abelii | ENSPPYG00000008636 | 1 retrocopy |