Parental gene:

RPL7A, ENSG00000148303

Aliases:RPL7A, L7A, SURF3, TRUP
Description:ribosomal protein L7a [Source:HGNC Symbol;Acc:10364]
Organism:Human (Homo sapiens)
Coordinates:9:136215068..136218281(+)


>ENSG00000148303
ATGCCGAAAGGAAAGAAGGCCAAGGGAAAGAAGGTGGCTCCGGCCCCAGCTGTCGTGAAGAAGCAGGAGGCTAAGAAAGT
GGTGAATCCCCTGTTTGAGAAAAGGCCTAAGAATTTTGGCATTGGACAGGACATCCAGCCCAAAAGAGACCTCACCCGCT
TTGTGAAATGGCCCCGCTATATCAGGTTGCAGCGGCAGAGAGCCATCCTCTATAAGCGGCTGAAAGTGCCTCCTGCGATT
AACCAGTTCACCCAGGCCCTGGACCGCCAAACAGCTACTCAGCTGCTTAAGCTGGCCCACAAGTACAGACCAGAGACAAA
GCAAGAGAAGAAGCAGAGACTGTTGGCCCGGGCCGAGAAGAAGGCTGCTGGCAAAGGGGACGTCCCAACGAAGAGACCAC
CTGTCCTTCGAGCAGGAGTTAACACCGTCACCACCTTGGTGGAGAACAAGAAAGCTCAGCTGGTGGTGATTGCACACGAC
GTGGATCCCATCGAGCTGGTTGTCTTCTTGCCTGCCCTGTGTCGTAAAATGGGGGTCCCTTACTGCATTATCAAGGGAAA
GGCAAGACTGGGACGTCTAGTCCACAGGAAGACCTGCACCACTGTCGCCTTCACACAGGTGAACTCGGAAGACAAAGGCG
CTTTGGCTAAGCTGGTGGAAGCTATCAGGACCAATTACAATGACAGATACGATGAGATCCGCCGTCACTGGGGTGGCAAT
GTCCTGGGTCCTAAGTCTGTGGCTCGTATCGCCAAGCTCGAAAAGGCAAAGGCTAAAGAACTTGCCACTAAACTGGGTTA
A

Library Parental gene expression (RPM)
bodymap2_liver 230 .18 RPM
bodymap2_lung 639 .05 RPM
bodymap2_breast 428 .06 RPM
bodymap2_adipose 630 .89 RPM
bodymap2_adrenal 818 .53 RPM
bodymap2_skeletal_muscle 405 .24 RPM
bodymap2_thyroid 506 .97 RPM
bodymap2_prostate 927 .73 RPM
bodymap2_colon 800 .16 RPM
bodymap2_testis 481 .94 RPM
bodymap2_brain 138 .06 RPM
bodymap2_heart 174 .83 RPM
bodymap2_white_blood_cells 875 .28 RPM
bodymap2_lymph_node 731 .09 RPM
bodymap2_ovary 1017 .07 RPM
bodymap2_kidney 375 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011708 possible_ortholog 29 retrogenes
retro_amel_1000, retro_amel_1058, retro_amel_1149, retro_amel_1159, retro_amel_1207, retro_amel_1220, retro_amel_1269, retro_amel_1314, retro_amel_1417, retro_amel_142, retro_amel_1429, retro_amel_1471, retro_amel_1499, retro_amel_1506, retro_amel_1641, retro_amel_1644, retro_amel_169, retro_amel_170, retro_amel_1812, retro_amel_1873, retro_amel_357, retro_amel_463, retro_amel_525, retro_amel_529, retro_amel_544, retro_amel_671, retro_amel_726, retro_amel_758, retro_amel_801,
Bos taurus ENSBTAG00000011559 ortholog_one2one 5 retrogenes
retro_btau_1345, retro_btau_1494, retro_btau_564, retro_btau_890, retro_btau_936,
Canis familiaris ENSCAFG00000017680 possible_ortholog 36 retrogenes
retro_cfam_1121, retro_cfam_1123, retro_cfam_1165, retro_cfam_1187, retro_cfam_1242, retro_cfam_1365, retro_cfam_1429, retro_cfam_1471, retro_cfam_1497, retro_cfam_1532, retro_cfam_1553, retro_cfam_1563, retro_cfam_1683, retro_cfam_1711, retro_cfam_1721, retro_cfam_1750, retro_cfam_1865, retro_cfam_1898, retro_cfam_2032, retro_cfam_2103, retro_cfam_2111, retro_cfam_2120, retro_cfam_2144, retro_cfam_311, retro_cfam_340, retro_cfam_380, retro_cfam_423, retro_cfam_476, retro_cfam_518, retro_cfam_605, retro_cfam_694, retro_cfam_723, retro_cfam_827, retro_cfam_853, retro_cfam_927, retro_cfam_935,
Callithrix jacchus ENSCJAG00000014827 possible_ortholog 3 retrogenes
retro_cjac_199, retro_cjac_343, retro_cjac_49,
Dipodomys ordii ENSDORG00000006471 ortholog_one2one 3 retrogenes
retro_dord_198, retro_dord_218, retro_dord_516,
Equus caballus ENSECAG00000008548 possible_ortholog 2 retrogenes
retro_ecab_4, retro_ecab_402,
Felis catus ENSFCAG00000005825 possible_ortholog 20 retrogenes
retro_fcat_1123, retro_fcat_1137, retro_fcat_1170, retro_fcat_1277, retro_fcat_1315, retro_fcat_1318, retro_fcat_1344, retro_fcat_1528, retro_fcat_1583, retro_fcat_1771, retro_fcat_1980, retro_fcat_214, retro_fcat_252, retro_fcat_385, retro_fcat_389, retro_fcat_468, retro_fcat_542, retro_fcat_628, retro_fcat_694, retro_fcat_943,
Gorilla gorilla ENSGGOG00000014442 possible_ortholog 48 retrogenes
retro_ggor_1034, retro_ggor_1042, retro_ggor_1087, retro_ggor_1107, retro_ggor_1190, retro_ggor_1249, retro_ggor_1408, retro_ggor_1409, retro_ggor_1460, retro_ggor_1541, retro_ggor_1591, retro_ggor_172, retro_ggor_1724, retro_ggor_1881, retro_ggor_194, retro_ggor_2004, retro_ggor_2033, retro_ggor_2087, retro_ggor_2117, retro_ggor_2147, retro_ggor_2313, retro_ggor_2410, retro_ggor_2430, retro_ggor_2480, retro_ggor_2522, retro_ggor_2578, retro_ggor_2611, retro_ggor_2617, retro_ggor_2618, retro_ggor_2779, retro_ggor_2781, retro_ggor_2871, retro_ggor_2872, retro_ggor_288, retro_ggor_2960, retro_ggor_310, retro_ggor_333, retro_ggor_386, retro_ggor_539, retro_ggor_626, retro_ggor_636, retro_ggor_640, retro_ggor_658, retro_ggor_663, retro_ggor_815, retro_ggor_865, retro_ggor_904, retro_ggor_963,
Loxodonta africana ENSLAFG00000006436 possible_ortholog 2 retrogenes
retro_lafr_1059, retro_lafr_1132,
Macropus eugenii ENSMEUG00000014550 ortholog_one2one 16 retrogenes
retro_meug_1268, retro_meug_133, retro_meug_1362, retro_meug_1523, retro_meug_1581, retro_meug_1872, retro_meug_2011, retro_meug_2080, retro_meug_2101, retro_meug_2123, retro_meug_401, retro_meug_632, retro_meug_654, retro_meug_687, retro_meug_699, retro_meug_919,
Macaca mulatta ENSMMUG00000022341 possible_ortholog 9 retrogenes
retro_mmul_113, retro_mmul_130, retro_mmul_204, retro_mmul_230, retro_mmul_252, retro_mmul_259, retro_mmul_309, retro_mmul_33, retro_mmul_4,
Monodelphis domestica ENSMODG00000012754 ortholog_one2one 3 retrogenes
retro_mdom_1347, retro_mdom_418, retro_mdom_586,
Mustela putorius furo ENSMPUG00000012398 possible_ortholog 13 retrogenes
retro_mputfur_1081, retro_mputfur_1210, retro_mputfur_1281, retro_mputfur_1344, retro_mputfur_1380, retro_mputfur_1611, retro_mputfur_1612, retro_mputfur_325, retro_mputfur_459, retro_mputfur_656, retro_mputfur_698, retro_mputfur_792, retro_mputfur_900,
Mus musculus ENSMUSG00000062647 possible_ortholog 10 retrogenes
retro_mmus_120, retro_mmus_141, retro_mmus_165, retro_mmus_166, retro_mmus_214, retro_mmus_226, retro_mmus_267, retro_mmus_34, retro_mmus_43, retro_mmus_93,
Nomascus leucogenys ENSNLEG00000013068 ortholog_one2one 22 retrogenes
retro_nleu_1051, retro_nleu_1056, retro_nleu_137, retro_nleu_1404, retro_nleu_1418, retro_nleu_1682, retro_nleu_1920, retro_nleu_2130, retro_nleu_2254, retro_nleu_2341, retro_nleu_2397, retro_nleu_2423, retro_nleu_2641, retro_nleu_267, retro_nleu_2822, retro_nleu_2853, retro_nleu_399, retro_nleu_432, retro_nleu_562, retro_nleu_780, retro_nleu_796, retro_nleu_82,
Otolemur garnettii ENSOGAG00000014027 possible_ortholog 16 retrogenes
retro_ogar_1014, retro_ogar_1172, retro_ogar_1638, retro_ogar_1735, retro_ogar_1815, retro_ogar_2774, retro_ogar_3012, retro_ogar_3097, retro_ogar_319, retro_ogar_404, retro_ogar_57, retro_ogar_685, retro_ogar_758, retro_ogar_850, retro_ogar_926, retro_ogar_994,
Pteropus vampyrus ENSPVAG00000017045 ortholog_one2one 11 retrogenes
retro_pvam_1240, retro_pvam_125, retro_pvam_1288, retro_pvam_1371, retro_pvam_1472, retro_pvam_270, retro_pvam_307, retro_pvam_333, retro_pvam_510, retro_pvam_540, retro_pvam_640,
Rattus norvegicus ENSRNOG00000049097 possible_ortholog 10 retrogenes
retro_rnor_123, retro_rnor_15, retro_rnor_238, retro_rnor_303, retro_rnor_323, retro_rnor_346, retro_rnor_368, retro_rnor_398, retro_rnor_403, retro_rnor_86,
Sarcophilus harrisii ENSSHAG00000004337 ortholog_one2one 4 retrogenes
retro_shar_157, retro_shar_338, retro_shar_401, retro_shar_494,
Ictidomys tridecemlineatus ENSSTOG00000003671 possible_ortholog 3 retrogenes
retro_itri_1034, retro_itri_53, retro_itri_920,
Tursiops truncatus ENSTTRG00000007645 ortholog_one2one 3 retrogenes
retro_ttru_1334, retro_ttru_1681, retro_ttru_1824,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_428 77.14 65.41
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2. retro_hsap_467 66.97 82.71
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3. retro_hsap_682 85.47 66.17
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4. retro_hsap_707 84.21 100.00
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5. retro_hsap_801 68.16 82.71
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6. retro_hsap_809 73.81 76.69
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7. retro_hsap_1229 61.18 55.64
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8. retro_hsap_1438 98.12 100.00
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9. retro_hsap_2037 85.71 65.41
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10. retro_hsap_2544 94.74 100.00
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11. retro_hsap_3019 58.61 87.97
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12. retro_hsap_3081 86.44 66.17
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13. retro_hsap_3133 90.50 75.19
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14. retro_hsap_3202 83.75 59.02
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15. retro_hsap_3421 86.47 100.00
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16. retro_hsap_3503 64.58 87.59
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17. retro_hsap_3668 74.52 98.12
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18. retro_hsap_3830 80.65 68.80
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19. retro_hsap_3890 73.78 99.25
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20. retro_hsap_4296 75.00 60.15
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21. retro_hsap_4754 66.51 80.83
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Download FASTA sequences of all ENSG00000148303 retrocopies