Parental gene:

PPIA, ENSTBEG00000017484

Aliases:None
Description:peptidylprolyl isomerase A (cyclophilin A) [Source:HGNC Symbol;Acc:9253]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:scaffold_122444:7312..10700(+)


>ENSTBEG00000017484
ATGGTCAACCCTTGCGTGTTCTTCGACATCGCTGTTGACGGCGAGCCCTTGGGCCGCGTCTCCTTCGAGCTGTATGCAGA
CAAAGTTCCAAAGACAGCAAAAAACTTTCGTGCTTTGAGCACTGGAGAGAAAGGATTTGGCTATAAGGGTTCCTGCTTTC
ACAGAATTATTCCAGGGTTTATGTGCCAGGGTGGCGACTTCACACGCCATAATGGTACTGGTGGCAAGTCCATTTATGGT
GAGAAATTCGAAGATGAGAACTTCATCCTGAAACATACAGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACAC
AAACGGTTCTCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTCTTTGGCAAGGTGAAAG
AGGGCATGAATATTGTGGAAGCCATGGAGCGCTTTGGGTCCAAGAATGGCAAGACCAGCAAGAAAATCACCATTGCTGAC
TGTGGACAACTCTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012003 possible_ortholog 12 retrogenes
retro_btau_1005, retro_btau_1448, retro_btau_155, retro_btau_1696, retro_btau_1806, retro_btau_272, retro_btau_334, retro_btau_335, retro_btau_345, retro_btau_414, retro_btau_751, retro_btau_934,
Callithrix jacchus ENSCJAG00000011969 possible_ortholog 54 retrogenes
retro_cjac_1065, retro_cjac_1080, retro_cjac_1083, retro_cjac_1092, retro_cjac_1097, retro_cjac_11, retro_cjac_1193, retro_cjac_1213, retro_cjac_1310, retro_cjac_1326, retro_cjac_1347, retro_cjac_1451, retro_cjac_147, retro_cjac_1678, retro_cjac_1710, retro_cjac_1760, retro_cjac_1782, retro_cjac_1982, retro_cjac_1989, retro_cjac_2043, retro_cjac_2060, retro_cjac_2062, retro_cjac_2118, retro_cjac_2286, retro_cjac_2327, retro_cjac_2376, retro_cjac_2425, retro_cjac_2426, retro_cjac_2479, retro_cjac_2540, retro_cjac_2688, retro_cjac_2863, retro_cjac_2881, retro_cjac_2977, retro_cjac_3073, retro_cjac_3077, retro_cjac_3101, retro_cjac_3196, retro_cjac_384, retro_cjac_4202, retro_cjac_4203, retro_cjac_501, retro_cjac_646, retro_cjac_649, retro_cjac_695, retro_cjac_704, retro_cjac_710, retro_cjac_714, retro_cjac_717, retro_cjac_755, retro_cjac_827, retro_cjac_834, retro_cjac_871, retro_cjac_971,
Echinops telfairi ENSETEG00000002186 possible_ortholog 21 retrogenes
retro_etel_115, retro_etel_1188, retro_etel_1292, retro_etel_1322, retro_etel_1670, retro_etel_1827, retro_etel_1875, retro_etel_1886, retro_etel_208, retro_etel_25, retro_etel_288, retro_etel_371, retro_etel_430, retro_etel_447, retro_etel_485, retro_etel_537, retro_etel_551, retro_etel_568, retro_etel_595, retro_etel_937, retro_etel_998,
Homo sapiens ENSG00000196262 ortholog_one2one 78 retrogenes
retro_hsap_1149, retro_hsap_1196, retro_hsap_1206, retro_hsap_1239, retro_hsap_1286, retro_hsap_1297, retro_hsap_1326, retro_hsap_1346, retro_hsap_1515, retro_hsap_1645, retro_hsap_1651, retro_hsap_1653, retro_hsap_1709, retro_hsap_1753, retro_hsap_1779, retro_hsap_1872, retro_hsap_1991, retro_hsap_2065, retro_hsap_2077, retro_hsap_2081, retro_hsap_2105, retro_hsap_2154, retro_hsap_2203, retro_hsap_2255, retro_hsap_2297, retro_hsap_2345, retro_hsap_242, retro_hsap_2426, retro_hsap_2429, retro_hsap_2464, retro_hsap_2497, retro_hsap_2518, retro_hsap_2641, retro_hsap_2652, retro_hsap_2717, retro_hsap_2727, retro_hsap_2788, retro_hsap_2789, retro_hsap_2792, retro_hsap_2794, retro_hsap_2826, retro_hsap_2843, retro_hsap_2886, retro_hsap_2978, retro_hsap_3184, retro_hsap_3310, retro_hsap_3348, retro_hsap_3351, retro_hsap_354, retro_hsap_3575, retro_hsap_375, retro_hsap_3751, retro_hsap_3781, retro_hsap_3835, retro_hsap_3880, retro_hsap_3916, retro_hsap_3960, retro_hsap_3966, retro_hsap_4035, retro_hsap_4128, retro_hsap_4274, retro_hsap_4285, retro_hsap_429, retro_hsap_4298, retro_hsap_4773, retro_hsap_4882, retro_hsap_527, retro_hsap_630, retro_hsap_649, retro_hsap_657, retro_hsap_694, retro_hsap_728, retro_hsap_733, retro_hsap_741, retro_hsap_774, retro_hsap_816, retro_hsap_839, retro_hsap_876,
Gorilla gorilla ENSGGOG00000026298 ortholog_one2many 4 retrogenes
retro_ggor_138, retro_ggor_15, retro_ggor_165, retro_ggor_28,
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
retro_meug_1024, retro_meug_1055, retro_meug_1089, retro_meug_1133, retro_meug_1269, retro_meug_1391, retro_meug_1576, retro_meug_1746, retro_meug_1880, retro_meug_1975, retro_meug_2013, retro_meug_2037, retro_meug_260, retro_meug_297, retro_meug_301, retro_meug_437, retro_meug_478, retro_meug_510, retro_meug_713, retro_meug_73,
Macaca mulatta ENSMMUG00000016638 ortholog_one2many 10 retrogenes
retro_mmul_1, retro_mmul_13, retro_mmul_132, retro_mmul_141, retro_mmul_161, retro_mmul_195, retro_mmul_245, retro_mmul_5, retro_mmul_56, retro_mmul_8,
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
retro_mdom_1373, retro_mdom_1524, retro_mdom_1856, retro_mdom_1884, retro_mdom_215, retro_mdom_272, retro_mdom_29, retro_mdom_730, retro_mdom_85,
Mus musculus ENSMUSG00000071866 ortholog_one2many 2 retrogenes
retro_mmus_242, retro_mmus_285,
Oryctolagus cuniculus ENSOCUG00000016662 possible_ortholog 3 retrogenes
retro_ocun_113, retro_ocun_1406, retro_ocun_237,
Otolemur garnettii ENSOGAG00000027997 possible_ortholog 31 retrogenes
retro_ogar_1090, retro_ogar_1201, retro_ogar_1305, retro_ogar_1329, retro_ogar_1336, retro_ogar_1562, retro_ogar_1634, retro_ogar_1741, retro_ogar_1889, retro_ogar_1893, retro_ogar_1920, retro_ogar_1973, retro_ogar_1974, retro_ogar_1999, retro_ogar_21, retro_ogar_2246, retro_ogar_2265, retro_ogar_2397, retro_ogar_2401, retro_ogar_2440, retro_ogar_2484, retro_ogar_2794, retro_ogar_2907, retro_ogar_2924, retro_ogar_2938, retro_ogar_2948, retro_ogar_3072, retro_ogar_3187, retro_ogar_3210, retro_ogar_357, retro_ogar_743,
Pongo abelii ENSPPYG00000017586 ortholog_one2many 12 retrogenes
retro_pabe_1065, retro_pabe_1330, retro_pabe_186, retro_pabe_221, retro_pabe_2267, retro_pabe_2469, retro_pabe_2633, retro_pabe_2730, retro_pabe_2812, retro_pabe_3474, retro_pabe_631, retro_pabe_995,
Pongo abelii ENSPPYG00000017587 ortholog_one2many 4 retrogenes
retro_pabe_1118, retro_pabe_2202, retro_pabe_3311, retro_pabe_3602,
Pan troglodytes ENSPTRG00000023064 ortholog_one2one 77 retrogenes
retro_ptro_1116, retro_ptro_1122, retro_ptro_1124, retro_ptro_1213, retro_ptro_1277, retro_ptro_1328, retro_ptro_1377, retro_ptro_1399, retro_ptro_1401, retro_ptro_1423, retro_ptro_1449, retro_ptro_1463, retro_ptro_1529, retro_ptro_1531, retro_ptro_1544, retro_ptro_1596, retro_ptro_1626, retro_ptro_1639, retro_ptro_1672, retro_ptro_1717, retro_ptro_1779, retro_ptro_1787, retro_ptro_1835, retro_ptro_1843, retro_ptro_1889, retro_ptro_1890, retro_ptro_1891, retro_ptro_1916, retro_ptro_1925, retro_ptro_195, retro_ptro_1952, retro_ptro_2012, retro_ptro_2014, retro_ptro_210, retro_ptro_2136, retro_ptro_2138, retro_ptro_2161, retro_ptro_2260, retro_ptro_2272, retro_ptro_2425, retro_ptro_2546, retro_ptro_2562, retro_ptro_2611, retro_ptro_2642, retro_ptro_2663, retro_ptro_2689, retro_ptro_2692, retro_ptro_278, retro_ptro_2806, retro_ptro_2899, retro_ptro_2904, retro_ptro_2914, retro_ptro_293, retro_ptro_2945, retro_ptro_2967, retro_ptro_3010, retro_ptro_3033, retro_ptro_3049, retro_ptro_326, retro_ptro_394, retro_ptro_458, retro_ptro_472, retro_ptro_477, retro_ptro_498, retro_ptro_518, retro_ptro_521, retro_ptro_527, retro_ptro_541, retro_ptro_567, retro_ptro_585, retro_ptro_783, retro_ptro_825, retro_ptro_853, retro_ptro_879, retro_ptro_889, retro_ptro_905, retro_ptro_921,
Rattus norvegicus ENSRNOG00000006423 ortholog_one2many 2 retrogenes
retro_rnor_360, retro_rnor_387,
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
retro_shar_164, retro_shar_383, retro_shar_750,
Ictidomys tridecemlineatus ENSSTOG00000010215 possible_ortholog 10 retrogenes
retro_itri_1073, retro_itri_1576, retro_itri_1683, retro_itri_1897, retro_itri_499, retro_itri_667, retro_itri_7, retro_itri_731, retro_itri_802, retro_itri_978,
Tupaia belangeri ENSTBEG00000015457 other_paralog 1 retrogene
retro_tbel_1906,
Tarsius syrichta ENSTSYG00000008973 possible_ortholog 23 retrogenes
retro_tsyr_1106, retro_tsyr_1266, retro_tsyr_1277, retro_tsyr_1530, retro_tsyr_1643, retro_tsyr_1816, retro_tsyr_1909, retro_tsyr_2040, retro_tsyr_2072, retro_tsyr_2097, retro_tsyr_388, retro_tsyr_400, retro_tsyr_408, retro_tsyr_430, retro_tsyr_459, retro_tsyr_478, retro_tsyr_481, retro_tsyr_507, retro_tsyr_641, retro_tsyr_705, retro_tsyr_760, retro_tsyr_847, retro_tsyr_924,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_64 82.02 54.27
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_tbel_80 57.52 67.07
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_tbel_204 89.44 85.98
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_tbel_221 78.90 65.85
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_tbel_267 71.72 59.76
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_tbel_415 89.17 73.17
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_tbel_521 80.25 93.29
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_tbel_541 62.59 82.93
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_tbel_618 81.21 100.00
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_tbel_764 85.98 100.00
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_tbel_831 77.48 66.46
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_tbel_832 73.01 96.34
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_tbel_887 85.22 70.12
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_tbel_900 82.20 71.95
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_tbel_910 78.66 98.78
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_tbel_922 79.39 100.00
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_tbel_946 75.93 95.73
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_tbel_1014 78.66 99.39
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_tbel_1098 61.34 70.73
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_tbel_1104 84.03 72.56
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_tbel_1106 85.00 84.15
Please wait, loading
Please wait, loading
Please wait, loading
22. retro_tbel_1180 85.11 57.32
Please wait, loading
Please wait, loading
Please wait, loading
23. retro_tbel_1661 76.40 96.95
Please wait, loading
Please wait, loading
Please wait, loading
24. retro_tbel_1689 74.39 100.00
Please wait, loading
Please wait, loading
Please wait, loading
25. retro_tbel_1808 67.35 59.76
Please wait, loading
Please wait, loading
Please wait, loading
26. retro_tbel_1813 81.51 72.56
Please wait, loading
Please wait, loading
Please wait, loading
27. retro_tbel_1831 78.88 98.17
Please wait, loading
Please wait, loading
Please wait, loading
28. retro_tbel_1895 80.15 82.32
Please wait, loading
Please wait, loading
Please wait, loading
29. retro_tbel_1904 82.76 53.05
Please wait, loading
Please wait, loading
Please wait, loading
30. retro_tbel_1913 64.44 81.71
Please wait, loading
Please wait, loading
Please wait, loading
31. retro_tbel_1918 86.67 54.27
Please wait, loading
Please wait, loading
Please wait, loading
32. retro_tbel_1936 73.00 60.98
Please wait, loading
Please wait, loading
Please wait, loading
33. retro_tbel_1938 90.54 90.24
Please wait, loading
Please wait, loading
Please wait, loading
34. retro_tbel_2013 78.44 100.00
Please wait, loading
Please wait, loading
Please wait, loading
35. retro_tbel_2014 93.29 100.00
Please wait, loading
Please wait, loading
Please wait, loading
36. retro_tbel_2054 72.67 96.34
Please wait, loading
Please wait, loading
Please wait, loading
37. retro_tbel_2098 81.41 93.29
Please wait, loading
Please wait, loading
Please wait, loading
38. retro_tbel_2144 84.24 100.00
Please wait, loading
Please wait, loading
Please wait, loading
39. retro_tbel_2175 73.15 64.02
Please wait, loading
Please wait, loading
Please wait, loading
40. retro_tbel_2557 76.58 95.73
Please wait, loading
Please wait, loading
Please wait, loading
41. retro_tbel_2681 77.84 100.00
Please wait, loading
Please wait, loading
Please wait, loading
42. retro_tbel_2691 81.60 76.22
Please wait, loading
Please wait, loading
Please wait, loading
43. retro_tbel_2714 84.48 69.51
Please wait, loading
Please wait, loading
Please wait, loading
44. retro_tbel_2824 72.73 71.95
Please wait, loading
Please wait, loading
Please wait, loading
45. retro_tbel_2834 80.75 96.95
Please wait, loading
Please wait, loading
Please wait, loading
46. retro_tbel_2851 83.55 92.68
Please wait, loading
Please wait, loading
Please wait, loading
47. retro_tbel_2897 66.09 69.51
Please wait, loading
Please wait, loading
Please wait, loading
48. retro_tbel_2938 89.63 99.39
Please wait, loading
Please wait, loading
Please wait, loading
49. retro_tbel_3004 74.55 100.00
Please wait, loading
Please wait, loading
Please wait, loading
50. retro_tbel_3054 84.00 60.98
Please wait, loading
Please wait, loading
Please wait, loading
51. retro_tbel_3104 73.65 88.41
Please wait, loading
Please wait, loading
Please wait, loading
52. retro_tbel_3142 77.71 100.00
Please wait, loading
Please wait, loading
Please wait, loading
53. retro_tbel_3153 74.07 98.17
Please wait, loading
Please wait, loading
Please wait, loading
54. retro_tbel_3311 74.19 56.10
Please wait, loading
Please wait, loading
Please wait, loading
55. retro_tbel_3337 57.58 99.39
Please wait, loading
Please wait, loading
Please wait, loading
56. retro_tbel_3421 71.28 57.32
Please wait, loading
Please wait, loading
Please wait, loading
57. retro_tbel_3423 89.09 100.00
Please wait, loading
Please wait, loading
Please wait, loading
58. retro_tbel_3477 78.05 100.00
Please wait, loading
Please wait, loading
Please wait, loading
59. retro_tbel_3639 86.90 88.41
Please wait, loading
Please wait, loading
Please wait, loading
60. retro_tbel_3691 81.56 85.98
Please wait, loading
Please wait, loading
Please wait, loading
61. retro_tbel_3767 78.05 99.39
Please wait, loading
Please wait, loading
Please wait, loading
62. retro_tbel_3847 66.96 69.51
Please wait, loading
Please wait, loading
Please wait, loading
63. retro_tbel_3880 86.67 100.00
Please wait, loading
Please wait, loading
Please wait, loading
64. retro_tbel_3890 62.75 62.20
Please wait, loading
Please wait, loading
Please wait, loading
65. retro_tbel_3979 78.26 69.51
Please wait, loading
Please wait, loading
Please wait, loading
66. retro_tbel_4019 71.53 83.54
Please wait, loading
Please wait, loading
Please wait, loading
67. retro_tbel_4155 73.77 73.78
Please wait, loading
Please wait, loading
Please wait, loading
68. retro_tbel_4325 60.58 63.41
Please wait, loading
Please wait, loading
Please wait, loading
69. retro_tbel_4332 78.57 59.15
Please wait, loading
Please wait, loading
Please wait, loading
70. retro_tbel_4364 78.75 96.95
Please wait, loading
Please wait, loading
Please wait, loading
71. retro_tbel_4391 72.41 69.51
Please wait, loading
Please wait, loading
Please wait, loading
72. retro_tbel_4534 73.27 60.37
Please wait, loading
Please wait, loading
Please wait, loading
73. retro_tbel_4537 79.17 71.95
Please wait, loading
Please wait, loading
Please wait, loading
74. retro_tbel_4568 84.43 100.00
Please wait, loading
Please wait, loading
Please wait, loading
75. retro_tbel_4581 76.36 100.00
Please wait, loading
Please wait, loading
Please wait, loading
76. retro_tbel_4683 67.86 100.00
Please wait, loading
Please wait, loading
Please wait, loading
77. retro_tbel_4699 79.67 74.39
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTBEG00000017484 retrocopies