Parental gene:

ENSETEG00000002186

Aliases:None
Description:None
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_8188:62564..65328(+)


>ENSETEG00000002186
ATGGTCAACCCGACTGTGTTTTTCGACATAGCCGTCGACGGCGAGCCCCTCGGCCGCGTCGCTTTCGAGCTGTTTGCAGA
CAAAGTTCCAAAGACAGCAGAAAACTTCCGCGCTCTGAGCACTGGGGAGAAAGGTTTTGGTTATAAAGGTTCCTGCTTTC
ACAGAATCATTCCAGGGTTTATGTGCCAGGGTGGTGACTTCACGCGCCATAATGGCACTGGGGGCAAGTCCATCTATGGA
GAGAAATTTGAAGATGAGAACTTCATCCTGAAGCACACCGGTCCTGGCATCTTGTCGATGGCAAATGCTGGGCCCAATAC
GAACGGTTCCCAGTTTTTCATCTGTACCGCGAAGACTGAATGGTTGGATGGCAAGCACGTGGTCTTCGGTCAGGTGAAAG
AAGGCATGAACATTGTGGAAGCCATGGAGCGTTTTGGTTCCAGGAATGGCAAGACCATCAAGAAGATCACCATTGCTAAC
TGTGGGCAACTCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012003 possible_ortholog 12 retrogenes
Callithrix jacchus ENSCJAG00000011969 possible_ortholog 54 retrogenes
Cavia porcellus ENSCPOG00000002632 possible_ortholog 11 retrogenes
Homo sapiens ENSG00000196262 possible_ortholog 78 retrogenes
Gorilla gorilla ENSGGOG00000026298 possible_ortholog 4 retrogenes
Loxodonta africana ENSLAFG00000011345 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
Macaca mulatta ENSMMUG00000016638 possible_ortholog 10 retrogenes
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
Mus musculus ENSMUSG00000071866 possible_ortholog 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000016662 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000027997 ortholog_many2many 31 retrogenes
Pongo abelii ENSPPYG00000017586 possible_ortholog 12 retrogenes
Pongo abelii ENSPPYG00000017587 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000023064 possible_ortholog 77 retrogenes
Rattus norvegicus ENSRNOG00000006423 possible_ortholog 2 retrogenes
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000010215 possible_ortholog 10 retrogenes
Tupaia belangeri ENSTBEG00000017484 possible_ortholog 77 retrogenes
Tarsius syrichta ENSTSYG00000008973 ortholog_many2many 23 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_25 99.28 84.15
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2. retro_etel_115 54.76 100.00
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3. retro_etel_208 91.19 96.34
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4. retro_etel_288 68.24 51.83
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5. retro_etel_371 62.87 100.00
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6. retro_etel_430 88.79 64.02
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7. retro_etel_447 73.53 100.00
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8. retro_etel_485 69.23 54.27
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9. retro_etel_537 80.36 100.00
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10. retro_etel_551 80.36 100.00
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11. retro_etel_568 85.00 60.37
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12. retro_etel_595 89.88 100.00
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13. retro_etel_937 92.68 100.00
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14. retro_etel_998 83.65 63.41
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15. retro_etel_1188 77.91 97.56
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16. retro_etel_1292 68.86 100.00
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17. retro_etel_1322 67.86 67.07
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18. retro_etel_1670 73.94 100.00
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19. retro_etel_1827 67.48 98.78
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20. retro_etel_1875 65.06 98.17
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21. retro_etel_1886 85.71 96.34
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Download FASTA sequences of all ENSETEG00000002186 retrocopies