Parental gene:

PPIA, ENSGGOG00000026298

Aliases:None
Description:Peptidyl-prolyl cis-trans isomerase A [Source:UniProtKB/Swiss-Prot;Acc:Q0ZQL0]
Organism:Gorilla (Gorilla gorilla)
Coordinates:7:45759781..45764541(+)


>ENSGGOG00000026298
ATGGTCAACCCCACCGTGTTCTTCGACATTGCCGTCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTGAGCTGTTTGCAGA
CAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTC
ACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGG
GAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACAGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACAC
AAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAAG
AAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGAC
TGTGGACAACTCGAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 112 .84 RPM
SRP007412_cerebellum 68 .91 RPM
SRP007412_heart 19 .86 RPM
SRP007412_kidney 93 .06 RPM
SRP007412_liver 71 .27 RPM
SRP007412_testis 53 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012003 possible_ortholog 12 retrogenes
Callithrix jacchus ENSCJAG00000011969 possible_ortholog 54 retrogenes
Cavia porcellus ENSCPOG00000002632 possible_ortholog 11 retrogenes
Echinops telfairi ENSETEG00000002186 possible_ortholog 21 retrogenes
Homo sapiens ENSG00000196262 possible_ortholog 78 retrogenes
Gorilla gorilla ENSGGOG00000027442 within_species_paralog 1 retrogene
Loxodonta africana ENSLAFG00000011345 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
Macaca mulatta ENSMMUG00000016638 possible_ortholog 10 retrogenes
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
Mus musculus ENSMUSG00000071866 ortholog_many2many 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000016662 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000027997 possible_ortholog 31 retrogenes
Pongo abelii ENSPPYG00000017586 possible_ortholog 12 retrogenes
Pongo abelii ENSPPYG00000017587 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000023064 possible_ortholog 77 retrogenes
Rattus norvegicus ENSRNOG00000006423 ortholog_many2many 2 retrogenes
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000010215 possible_ortholog 10 retrogenes
Tupaia belangeri ENSTBEG00000017484 ortholog_one2many 77 retrogenes
Tarsius syrichta ENSTSYG00000008973 possible_ortholog 23 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_15 87.76 89.09
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2. retro_ggor_28 82.65 57.58
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3. retro_ggor_138 85.62 96.97
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4. retro_ggor_165 82.93 74.55
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Download FASTA sequences of all ENSGGOG00000026298 retrocopies