Parental gene: | ENSCJAG00000011969 |
| Aliases: | None |
| Description: | Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:F6SQW1] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:12335193..12339540(+) |
>ENSCJAG00000011969
ATGGTCAACCCCACCGTGTTCTTCGACATTGCCGTCGACGGCGAGCCCTTGGGCCGCGTCTCCTTCGAGCTGTTTGCAGA
CAAGGTTCCAAAGACAGCAGAAAACTTCCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTC
ACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTACGGG
GAGAAATTTGATGATGAGAACTTCATCCTAAAGCATACAGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACAC
AAACGGTTCCCAGTTTTTCATCTGCACTGTCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTCTTTGGCAAGGTGAAAG
AAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGAC
TGTGGACAACTTTAA
ATGGTCAACCCCACCGTGTTCTTCGACATTGCCGTCGACGGCGAGCCCTTGGGCCGCGTCTCCTTCGAGCTGTTTGCAGA
CAAGGTTCCAAAGACAGCAGAAAACTTCCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTC
ACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTACGGG
GAGAAATTTGATGATGAGAACTTCATCCTAAAGCATACAGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACAC
AAACGGTTCCCAGTTTTTCATCTGCACTGTCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTCTTTGGCAAGGTGAAAG
AAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGAC
TGTGGACAACTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 60 .34 RPM |
| SRP051959_skeletal_muscle | 30 .70 RPM |
| SRP051959_lymph_node | 55 .89 RPM |
| SRP051959_lung | 51 .18 RPM |
| SRP051959_liver | 76 .85 RPM |
| SRP051959_kidney | 73 .46 RPM |
| SRP051959_heart | 48 .83 RPM |
| SRP051959_colon | 77 .99 RPM |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_11 | 78.44 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_147 | 95.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_384 | 95.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_501 | 78.92 | 99.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_646 | 95.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_649 | 85.54 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cjac_695 | 77.16 | 98.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_cjac_704 | 98.78 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_cjac_710 | 76.47 | 70.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_cjac_714 | 91.07 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_cjac_717 | 95.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_cjac_755 | 88.34 | 98.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_cjac_827 | 93.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_cjac_834 | 78.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_cjac_871 | 69.51 | 98.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_cjac_971 | 77.05 | 73.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_cjac_1065 | 82.88 | 66.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_cjac_1080 | 87.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_cjac_1083 | 85.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_cjac_1092 | 86.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_cjac_1097 | 74.78 | 68.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_cjac_1193 | 93.90 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_cjac_1213 | 73.21 | 99.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_cjac_1310 | 67.86 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_cjac_1326 | 80.98 | 98.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_cjac_1347 | 86.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_cjac_1451 | 78.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_cjac_1678 | 98.17 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_cjac_1710 | 91.52 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_cjac_1760 | 91.52 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_cjac_1782 | 80.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_cjac_1982 | 92.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_cjac_1989 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_cjac_2043 | 70.40 | 75.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 35. | retro_cjac_2060 | 88.34 | 98.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 36. | retro_cjac_2062 | 77.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 37. | retro_cjac_2118 | 89.22 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 38. | retro_cjac_2286 | 78.05 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 39. | retro_cjac_2327 | 95.17 | 88.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 40. | retro_cjac_2376 | 88.75 | 97.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 41. | retro_cjac_2425 | 74.63 | 81.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 42. | retro_cjac_2426 | 74.39 | 99.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 43. | retro_cjac_2479 | 91.46 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 44. | retro_cjac_2540 | 75.48 | 93.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 45. | retro_cjac_2688 | 89.22 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 46. | retro_cjac_2863 | 95.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 47. | retro_cjac_2881 | 81.21 | 90.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 48. | retro_cjac_2977 | 78.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 49. | retro_cjac_3073 | 80.61 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 50. | retro_cjac_3077 | 91.41 | 99.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 51. | retro_cjac_3101 | 83.12 | 96.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 52. | retro_cjac_3196 | 80.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 53. | retro_cjac_4202 | 81.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 54. | retro_cjac_4203 | 82.61 | 84.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011969 retrocopies