RetrogeneDB ID: | retro_chof_2294 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_64025:379..775(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H3F3B | ||
Ensembl ID: | ENSCHOG00000009661 | ||
Aliases: | None | ||
Description: | H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765] |
Percent Identity: | 73.48 % |
Parental protein coverage: | 97.06 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | ARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL |
A.TKQTA.K.T..K.PRK.LA.KA..K..PST.GVKKP...RPGTVAL.EIR.YQKSTELLI..LP.Q.L | |
Retrocopy | APTKQTAHKLTSSKTPRK*LAAKATGKGVPSTRGVKKPLHFRPGTVALCEIRCYQKSTELLIYQLPSQSL |
Parental | VREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG |
V.EI.QDFKTDL.FQSAAIG.LQEASEA.LVGLFEDTNLCAI..K.VTIM.K.IQLA..I.G | |
Retrocopy | V*EITQDFKTDLPFQSAAIGTLQEASEAQLVGLFEDTNLCAIYGKHVTIMSKGIQLAQHIGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |