RetrogeneDB ID: | retro_chof_517 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_116814:229..637(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H3F3B | ||
Ensembl ID: | ENSCHOG00000009661 | ||
Aliases: | None | ||
Description: | H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765] |
Percent Identity: | 86.03 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQR |
.......A........PRKQLATKAA.KSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKL.FQR | |
Retrocopy | LVQSRLPANRPAVKHPPRKQLATKAASKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLLFQR |
Parental | LVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
LVREIAQDFKTDL.FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI.GERA | |
Retrocopy | LVREIAQDFKTDLWFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIHGERA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |