RetrogeneDB ID: | retro_tbel_978 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3489:273387..273792(+) | ||
Located in intron of: | ENSTBEG00000003330 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006177 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.89 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGV-KKPHRYRPGTV-ALREIRRYQKSTELLIRKLPF |
.A.TKQ.A.KSTGGKAPRKQLATKAARKSAPSTGG..KKPHRYRP.TV.AL.EIR.YQKSTEL.I.KLPF | |
Retrocopy | LAHTKQPASKSTGGKAPRKQLATKAARKSAPSTGGG<KKPHRYRPSTV<ALHEIRHYQKSTELMICKLPF |
Parental | QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGL-FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
Q.LVREIAQDFKTDL.FQSAAIGAL.EASEAYLVGL.FEDTNLC.IHAK.VT.MPKDIQLAR.IRGE.A | |
Retrocopy | QHLVREIAQDFKTDLCFQSAAIGAL*EASEAYLVGL<FEDTNLCTIHAKHVTVMPKDIQLARCIRGECA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |