Parental gene:

ENSTBEG00000006177

Aliases:None
Description:None
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3749:19737..27643(+)


>ENSTBEG00000006177
ATGGCTCGTACAAAGCAGACAGCCCGCAAATCCACCGGTGGTAAAGCACCCAGGAAGCAACTGGCTACAAAAGCCGCTCG
CAAGAGTGCGCCCTCTACTGGAGGTGTGAAGAAACCTCATCGTTACAGGCCCGGTACTGTGGCACTCCGTGAAATTAGAC
GTTATCAGAAGTCCACTGAACTTCTGATTCGCAAACTTCCTTTCCAACGTCTGGTGCGAGAAATTGCTCAGGATTTCAAA
ACAGATCTGCGCTTCCAGAGCGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAGGCCTACTTGGTTGGCCTTTTCGAAGA
TACCAACCTGTGTGCTATCCATGCCAAACGTGTAACAATAATGCCAAAAGACATCCAGCTAGCACGCCGCATACGTGGAG
AACGTGCTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009765 ortholog_one2one 3 retrogenes
retro_amel_1636, retro_amel_1794, retro_amel_192,
Choloepus hoffmanni ENSCHOG00000009661 ortholog_one2many 10 retrogenes
retro_chof_1580, retro_chof_1635, retro_chof_1911, retro_chof_2281, retro_chof_2294, retro_chof_2343, retro_chof_2546, retro_chof_454, retro_chof_517, retro_chof_530,
Cavia porcellus ENSCPOG00000004707 ortholog_one2one 7 retrogenes
retro_cpor_1059, retro_cpor_1390, retro_cpor_1524, retro_cpor_432, retro_cpor_695, retro_cpor_842, retro_cpor_853,
Gorilla gorilla ENSGGOG00000022928 possible_ortholog 7 retrogenes
retro_ggor_1964, retro_ggor_2181, retro_ggor_2198, retro_ggor_2357, retro_ggor_2805, retro_ggor_2905, retro_ggor_2987,
Loxodonta africana ENSLAFG00000021624 ortholog_one2many 4 retrogenes
retro_lafr_172, retro_lafr_410, retro_lafr_546, retro_lafr_832,
Myotis lucifugus ENSMLUG00000015447 ortholog_one2one 10 retrogenes
retro_mluc_146, retro_mluc_1571, retro_mluc_2286, retro_mluc_2344, retro_mluc_2364, retro_mluc_246, retro_mluc_2468, retro_mluc_2500, retro_mluc_392, retro_mluc_613,
Mus musculus ENSMUSG00000060743 ortholog_one2one 19 retrogenes
retro_mmus_1053, retro_mmus_1116, retro_mmus_1139, retro_mmus_1151, retro_mmus_1254, retro_mmus_2285, retro_mmus_2614, retro_mmus_2934, retro_mmus_3009, retro_mmus_3213, retro_mmus_3425, retro_mmus_395, retro_mmus_498, retro_mmus_808, retro_mmus_884, retro_mmus_885, retro_mmus_886, retro_mmus_959, retro_mmus_960,
Oryctolagus cuniculus ENSOCUG00000024644 possible_ortholog 2 retrogenes
retro_ocun_185, retro_ocun_217,
Oreochromis niloticus ENSONIG00000019975 possible_ortholog 5 retrogenes
retro_onil_41, retro_onil_46, retro_onil_56, retro_onil_60, retro_onil_63,
Pongo abelii ENSPPYG00000008636 possible_ortholog 1 retrogene
retro_pabe_2662,
Ictidomys tridecemlineatus ENSSTOG00000024226 ortholog_one2one 8 retrogenes
retro_itri_315, retro_itri_449, retro_itri_465, retro_itri_505, retro_itri_649, retro_itri_695, retro_itri_764, retro_itri_771,
Tupaia belangeri ENSTBEG00000016171 within_species_paralog 7 retrogenes
retro_tbel_3459, retro_tbel_3605, retro_tbel_3824, retro_tbel_3856, retro_tbel_4243, retro_tbel_4350, retro_tbel_674,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_15 93.38 100.00
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2. retro_tbel_110 94.12 100.00
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3. retro_tbel_170 71.43 70.59
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4. retro_tbel_391 86.76 99.26
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5. retro_tbel_487 93.38 100.00
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6. retro_tbel_592 92.65 100.00
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7. retro_tbel_783 81.16 100.00
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8. retro_tbel_978 84.89 100.00
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9. retro_tbel_1274 69.77 94.85
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10. retro_tbel_2335 86.73 82.35
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11. retro_tbel_3341 71.13 71.32
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12. retro_tbel_3342 69.23 85.29
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13. retro_tbel_3820 87.41 99.26
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Download FASTA sequences of all ENSTBEG00000006177 retrocopies