RetrogeneDB ID: | retro_meug_1138 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold30234:19313..19738(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CFL2 | ||
Ensembl ID: | ENSMEUG00000000739 | ||
Aliases: | None | ||
Description: | cofilin 2 (muscle) [Source:HGNC Symbol;Acc:1875] |
Percent Identity: | 65.75 % |
Parental protein coverage: | 85.54 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | TQEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTSFVKLLPLNDCRYALYDATYETK-E |
T....KK..K.....L...K.QIIVEE.KQILVGDI.D.V.DPYTSF.KLLPLNDC.Y.LYD.T.....E | |
Retrocopy | TTGDLKKDLKSFSYVLVKTK-QIIVEEVKQILVGDICDSVKDPYTSFEKLLPLNDCSYYLYDSTCKKR<E |
Parental | SKKED-IVFIFWAPECAPLKSKMIYASSKDAIKKKFTGIKH-EWQVNGLDDIKDRSTLGEKLG-GNVVVS |
.KK.....FIFW..ECAPLK.KMIYASSKDAIKKK..GIKH.E.Q.NGLDDIK...TL.EKL..G..VVS | |
Retrocopy | PKKTG<TLFIFWTSECAPLKNKMIYASSKDAIKKKCIGIKHDE*QGNGLDDIKNYLTLREKLV>GKIVVS |
Parental | LEGRPL |
LEGRPL | |
Retrocopy | LEGRPL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |