Parental gene:

CFL2, ENSLACG00000018011

Aliases:None
Description:None
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH126598.1:2601307..2609948(+)


>ENSLACG00000018011
ATGAAAGTAAGGAAGTCCTCAACACAGGAGGAAGTCAAAAAGAGAAAGAAAGCAGTACTTTTTTGCCTCAGTGATGACAA
GCGTTATATCATTGTCGAGGAAGGAAAGGAGATCTTGGTGGGTGACATTGGAGTGAGTGTAGAGGACCCCTATGGAGCCT
TTGTAGATCTGCTACCTGCAGCTGATTGCCGATATGCTTTATATGATGCTACATATGAAACAAGAGAGTCTAAGAAAGAA
GACTTGGTGTTTATATTCTGGGCCCCAGAGAATGCACCTCTAAAAAGTAAGATGATTTATGCTAGCTCTAAAGATGCCAT
TAAAAAGAAATTTACAGGCATTAAACATGAATGGCAAGTCAATGGCTTAGAGGATATTAAGCACATTTCAACACTTGCAG
AAAAGCTGGGAGGCAATGCGATAGTTTCACTTGAAGGAAAACCTTTGTAA

Library Parental gene expression (RPM)
DRP000627_pectoral_fin 16 .78 RPM
DRP000627_kidney 50 .97 RPM
DRP000627_pelvic_fin 28 .79 RPM
DRP000627_pharynx 70 .18 RPM
DRP000627_gill 40 .49 RPM
DRP000627_tail_muscle 54 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015508 ortholog_one2one 1 retrogene
retro_amel_1347,
Canis familiaris ENSCAFG00000032562 ortholog_one2one 1 retrogene
retro_cfam_1006,
Cavia porcellus ENSCPOG00000008996 ortholog_one2one 1 retrogene
retro_cpor_1003,
Dasypus novemcinctus ENSDNOG00000017048 ortholog_one2one 7 retrogenes
retro_dnov_1072, retro_dnov_1379, retro_dnov_1697, retro_dnov_2195, retro_dnov_2691, retro_dnov_715, retro_dnov_905,
Erinaceus europaeus ENSEEUG00000013155 ortholog_one2one 4 retrogenes
retro_eeur_335, retro_eeur_448, retro_eeur_513, retro_eeur_578,
Echinops telfairi ENSETEG00000006010 ortholog_one2many 3 retrogenes
retro_etel_1579, retro_etel_1622, retro_etel_684,
Felis catus ENSFCAG00000008480 ortholog_one2one 2 retrogenes
retro_fcat_1223, retro_fcat_1395,
Loxodonta africana ENSLAFG00000010579 ortholog_one2one 1 retrogene
retro_lafr_1041,
Macropus eugenii ENSMEUG00000000739 ortholog_one2one 11 retrogenes
retro_meug_1026, retro_meug_1138, retro_meug_125, retro_meug_1266, retro_meug_1666, retro_meug_1791, retro_meug_2025, retro_meug_2062, retro_meug_210, retro_meug_321, retro_meug_668,
Microcebus murinus ENSMICG00000009237 ortholog_one2one 1 retrogene
retro_mmur_493,
Monodelphis domestica ENSMODG00000012949 ortholog_one2many 1 retrogene
retro_mdom_171,
Mus musculus ENSMUSG00000062929 ortholog_one2one 1 retrogene
retro_mmus_660,
Oryctolagus cuniculus ENSOCUG00000009383 ortholog_one2one 1 retrogene
retro_ocun_1397,
Otolemur garnettii ENSOGAG00000032321 ortholog_one2one 1 retrogene
retro_ogar_2346,
Pteropus vampyrus ENSPVAG00000002798 ortholog_one2one 1 retrogene
retro_pvam_398,
Rattus norvegicus ENSRNOG00000045892 ortholog_one2one 1 retrogene
retro_rnor_684,
Sarcophilus harrisii ENSSHAG00000004732 ortholog_one2one 1 retrogene
retro_shar_528,
Sus scrofa ENSSSCG00000001959 ortholog_one2one 2 retrogenes
retro_sscr_1198, retro_sscr_327,
Ictidomys tridecemlineatus ENSSTOG00000001675 ortholog_one2one 3 retrogenes
retro_itri_1313, retro_itri_581, retro_itri_632,
Tupaia belangeri ENSTBEG00000000391 ortholog_one2many 2 retrogenes
retro_tbel_29, retro_tbel_4131,
Vicugna pacos ENSVPAG00000003273 ortholog_one2one 1 retrogene
retro_vpac_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_23 99.33 100.00
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Download FASTA sequences of all ENSLACG00000018011 retrocopies