RetrogeneDB ID: | retro_tbel_4131 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_6833:135778..136273(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000000942 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000000391 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.82 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | ASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRK-KAVLFCLSDDKR-IIVEETKQILVGDIGNTVEDPYTS |
ASGVTVNDEV.KVFNDMKVRKSSTQEEI...K.KAVLFCLSDDKR.IIVEE.KQILVGD.G.TVEDPYTS | |
Retrocopy | ASGVTVNDEVMKVFNDMKVRKSSTQEEIXXXK>KAVLFCLSDDKRQIIVEEAKQILVGDSGDTVEDPYTS |
Parental | FVKLLPLNDC-YALYDATYKTKESKKEDLVFIFWAPESAPLKSKMNYASSKDAIK-KKFTGIKHEWQVNG |
FVKLLPLNDC.YALYDATY.TKESKKEDLVFIFWAPESAPLKSKM.YASSKDAIK.KKFT.IKHEWQVNG | |
Retrocopy | FVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIK<KKFTDIKHEWQVNG |
Parental | LDDIKNCSMLGEKLGGNAVVSLEGKPL |
LDDIK.CS.LGEKLGGN.VVSLEGKPL | |
Retrocopy | LDDIKDCSTLGEKLGGNVVVSLEGKPL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |