RetrogeneDB ID: | retro_meug_210 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_6228:36333..36829(+) | ||
Located in intron of: | ENSMEUG00000006879 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CFL2 | ||
Ensembl ID: | ENSMEUG00000000739 | ||
Aliases: | None | ||
Description: | cofilin 2 (muscle) [Source:HGNC Symbol;Acc:1875] |
Percent Identity: | 87.65 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | LASGVTVN-DEVIKVFNDMKVRKSSTQEEIKKRKKAV-LFCLSDDKKQIIVEEAKQILVGDIGDTVEDPY |
.ASGVTVN.DE.IKVFNDMKVRKSSTQEEIKKRKKAV...CLSDDK.QIIVEEAKQI.VGD.GDTVED.. | |
Retrocopy | MASGVTVN>DEIIKVFNDMKVRKSSTQEEIKKRKKAV<F*CLSDDKNQIIVEEAKQIFVGDTGDTVEDLD |
Parental | TSFVKLLPLNDCRYALYDATYETKE-SKKEDIV-FIFWAPECAPLKSKMIYASSKDAIKKKFTGIKHEWQ |
TSFVKLLPLNDCRYALYDAT..TKE..KKED.V.FIFWAPECAPLKSKMIY..SKDAIKKKFTGIKHEWQ | |
Retrocopy | TSFVKLLPLNDCRYALYDATHGTKE<AKKEDLV<FIFWAPECAPLKSKMIYTNSKDAIKKKFTGIKHEWQ |
Parental | VNGLDDIKDRSTLGEKLGGNVVVSLEGRPL |
VNGLDDIKDRSTLGE.LG.NVVVSLEGRPL | |
Retrocopy | VNGLDDIKDRSTLGEELGRNVVVSLEGRPL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |