Parental gene:

CFL2, ENSSTOG00000001675

Aliases:None
Description:cofilin 2 (muscle) [Source:HGNC Symbol;Acc:1875]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393304.1:8947614..8948323(-)


>ENSSTOG00000001675
CAGGCATCTGGAGTTACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTAAGGAAATCTTCTACACAAGA
GGAGATCAAAAAAAGAAAGAAAGCAGTTCTCTTCTGTTTAAGCGATGACAAAAGACAAATAATTGTAGAGGAAGCAAAGC
AGATCTTGGTGGGTGACATTGGTGATACTGTAGAGGACCCCTACACATCTTTTGTGAAGTTGCTACCTCTGAATGATTGC
CGATATGCTTTGTACGATGCCACATACGAAACAAAAGAGTCTAAGAAAGAAGACCTAGTATTTATATTCTGGGCTCCTGA
AAGTGCACCCTTAAAAAGCAAGATGATTTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTCACAGGTATTAAACACG
AGTGGCAAGTAAATGGCTTGGATGATATTAAGGACCGATCAACACTTGGAGAGAAATTGGGAGGCAATGTAGTAGTTTCA
CTTGAAGGAAAACCATTATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015508 ortholog_one2one 1 retrogene
retro_amel_1347,
Canis familiaris ENSCAFG00000032562 ortholog_one2one 1 retrogene
retro_cfam_1006,
Cavia porcellus ENSCPOG00000008996 ortholog_one2one 1 retrogene
retro_cpor_1003,
Echinops telfairi ENSETEG00000006010 ortholog_one2many 3 retrogenes
retro_etel_1579, retro_etel_1622, retro_etel_684,
Felis catus ENSFCAG00000008480 ortholog_one2one 2 retrogenes
retro_fcat_1223, retro_fcat_1395,
Latimeria chalumnae ENSLACG00000018011 ortholog_one2one 1 retrogene
retro_lcha_23,
Loxodonta africana ENSLAFG00000010579 ortholog_one2one 1 retrogene
retro_lafr_1041,
Macropus eugenii ENSMEUG00000000739 ortholog_one2one 11 retrogenes
retro_meug_1026, retro_meug_1138, retro_meug_125, retro_meug_1266, retro_meug_1666, retro_meug_1791, retro_meug_2025, retro_meug_2062, retro_meug_210, retro_meug_321, retro_meug_668,
Microcebus murinus ENSMICG00000009237 ortholog_one2one 1 retrogene
retro_mmur_493,
Monodelphis domestica ENSMODG00000012949 ortholog_one2many 1 retrogene
retro_mdom_171,
Mus musculus ENSMUSG00000062929 ortholog_one2one 1 retrogene
retro_mmus_660,
Otolemur garnettii ENSOGAG00000032321 ortholog_one2one 1 retrogene
retro_ogar_2346,
Pteropus vampyrus ENSPVAG00000002798 ortholog_one2one 1 retrogene
retro_pvam_398,
Rattus norvegicus ENSRNOG00000045892 ortholog_one2one 1 retrogene
retro_rnor_684,
Sarcophilus harrisii ENSSHAG00000004732 ortholog_one2one 1 retrogene
retro_shar_528,
Sus scrofa ENSSSCG00000001959 ortholog_one2one 2 retrogenes
retro_sscr_1198, retro_sscr_327,
Ictidomys tridecemlineatus ENSSTOG00000027968 within_species_paralog 4 retrogenes
retro_itri_144, retro_itri_1456, retro_itri_1734, retro_itri_685,
Tupaia belangeri ENSTBEG00000000391 possible_ortholog 2 retrogenes
retro_tbel_29, retro_tbel_4131,
Vicugna pacos ENSVPAG00000003273 ortholog_one2one 1 retrogene
retro_vpac_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_581 66.92 77.71
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2. retro_itri_632 69.37 65.66
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3. retro_itri_1313 92.77 99.40
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Download FASTA sequences of all ENSSTOG00000001675 retrocopies