RetrogeneDB ID: | retro_itri_632 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393308.1:5922955..5923274(+) | ||
Located in intron of: | ENSSTOG00000002750 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CFL2 | ||
Ensembl ID: | ENSSTOG00000001675 | ||
Aliases: | None | ||
Description: | cofilin 2 (muscle) [Source:HGNC Symbol;Acc:1875] |
Percent Identity: | 69.37 % |
Parental protein coverage: | 65.66 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | VGDIGDTVEDPYTS-FVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIK |
....GDTV.D.YTS.FVKLL.LN...Y.LY..TYET...K...L..IFWAP..A.LKS.MI.A.SKDAIK | |
Retrocopy | MSNTGDTVKDSYTS<FVKLLILNYH*YTLYSVTYETRM*KT*HL--IFWAPQNASLKSNMISATSKDAIK |
Parental | KKFTGIKHEWQVNGL-DDIKDRSTLGEKLGGNVVVSLEGKP |
KKF.GIKHEWQVNGL.D.IKD.STLGEKLGGN.VVSLEG.P | |
Retrocopy | KKFIGIKHEWQVNGL<DHIKDHSTLGEKLGGNAVVSLEGNP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |