RetrogeneDB ID: | retro_nleu_932 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397276.1:10356835..10357353(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TAF9B | ||
Ensembl ID: | ENSNLEG00000001378 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.6 % |
Parental protein coverage: | 66. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | TSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLP-PDRYCLTAPNYRLKSLIKK-GPNQGRL-VPRLSVGA |
TS.P.R.FLLDIA.Q.N.TPLPLIKPY..P....P...CL.A.NYRLKSL.KK.....GR...P.LS.G. | |
Retrocopy | TSSPLRAFLLDIASQRN*TPLPLIKPYLDPNSI>PNGHCLIASNYRLKSLQKKISTSAGRVRIPWLSIGS |
Parental | VSSK---PTTTIATPQTVSVPNKVATPMSVTSQ-RFTVQIPPSQSTPVK-PVPATTAVQNVLINPSMIGP |
V.S....PT....TPQ..SV..KV.TPMS.T...RFTVQ...SQ....K....AT..V..V.IN.S.... | |
Retrocopy | VTSRPNNPTLGATTPQIMSVLTKVVTPMSLTGN>RFTVQLSTSQTPAIKVSISATSSVKSVPINQSLFRS |
Parental | KNILITTNMVSSQNTAN-EANPLKRKHEDDDDND |
KNILITTNM.SSQN.A.....PLKRKH..DD..D | |
Retrocopy | KNILITTNMESSQNIASGSSSPLKRKH*EDDNDD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |