RetrogeneDB ID: | retro_nleu_1677 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397303.1:14791719..14792460(-) | ||
Located in intron of: | ENSNLEG00000004086 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TAF9B | ||
Ensembl ID: | ENSNLEG00000001378 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.97 % |
Parental protein coverage: | 96. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MESGKMAPPKNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADD |
MESGKMA.PK..P.DA..MAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKK..VDADD | |
Retrocopy | MESGKMASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADD |
Parental | VRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLIKK-GPNQ |
VRLAIQCRADQSFTSPPPRDFLLDIARQ.NQTPLPLIKPY.GPRLPPDRYCLTAPNYRLKSL.KK..... | |
Retrocopy | VRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKSLQKKASTSA |
Parental | GRL-VPRLSVGAVSSKPTTT---IATPQTVSVPNKVATPMSVTSQRFTVQIPPSQSTPVK-PVPATTAVQ |
GR..VPRLSVG.V.S.P.T......TPQT.SV..KV.TPMS.T.QRFTVQ.P.SQS..VK...PAT.AVQ | |
Retrocopy | GRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVGTPMSLTGQRFTVQMPTSQSPAVKASIPATSAVQ |
Parental | NVLINPSMIGPKNILITTNMVSSQNTANE-ANPLKRK |
NVLINPS.IG.KNILITTNMVSSQNTANE..N.LKRK | |
Retrocopy | NVLINPSLIGSKNILITTNMVSSQNTANESSNALKRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |