RetrogeneDB ID: | retro_pcap_378 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_58159:13110..13481(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSPCAG00000004787 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 94.4 % |
Parental protein coverage: | 99.2 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIH-KRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLN |
MAPAKKGGEKKKGRSAINEVVTREYTINIH..RIHG.GFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLN | |
Retrocopy | MAPAKKGGEKKKGRSAINEVVTREYTINIH<QRIHGIGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLN |
Parental | KAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDE |
KAV.AKGI.NVPYRI.VRLSRK.NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDE | |
Retrocopy | KAVGAKGIWNVPYRICVRLSRKHNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |