RetrogeneDB ID: | retro_ttru_215 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1573:127531..127862(+) | ||
Located in intron of: | ENSTTRG00000001490 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTTRG00000016447 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 75.22 % |
Parental protein coverage: | 88.8 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIR-KFAMKEMGTPDVRIDTRLNKAVWAKGIR-NVPY |
.AINEVVTREYTINIHK.IHG.GFK..AP..LK.IR.KF.MKEMGTPDV..D.RLNKAVWAKGIR.NVPY | |
Retrocopy | TAINEVVTREYTINIHKHIHGLGFKMPAPQTLKKIR<KFSMKEMGTPDVHTDIRLNKAVWAKGIR<NVPY |
Parental | RIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
.I.V.L.RKR.EDEDSPNKLY.LV..VPV.TFKNLQ.V....N | |
Retrocopy | WIHVWLFRKRKEDEDSPNKLYMLVINVPVITFKNLQSVWIRAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |