RetrogeneDB ID: | retro_ttru_785 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3414:338224..338553(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTTRG00000016447 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 77.31 % |
Parental protein coverage: | 94.4 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
MAPAKKG..KKKGRSAIN.VVTREYTIN.HK..HGVGFKK.AP.ALKEI.K.....MGTP.VRID.RL.K | |
Retrocopy | MAPAKKGDKKKKGRSAINKVVTREYTINVHKHVHGVGFKKDAPPALKEIWK----AMGTPHVRIDVRL-K |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLV-TYVPVTTFKNLQ |
AVW.KGIRNVP...RVRLSRK.NED....NKLYTLV.TYVPVTTFKNLQ | |
Retrocopy | AVWTKGIRNVP*LTRVRLSRKCNEDS---NKLYTLV<TYVPVTTFKNLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |